Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1130 |
Symbol | pcm |
ID | 3716708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1306541 |
End bp | 1307218 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_346862 |
Protein GI | 77457357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.491382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTG AACAAGACGA CAGGCTGCGC AGCGGCATCG GGATGACGTC CCAGCGAACC CGTGAGCGCC TGATCCAGCG TCTGTACGAA GAGGGCGTTT CCAACGCCAG CGTGCTGGAA GTGATCCGCC GCACCCCGCG ACACCTGTTC GTCGATGAAG CGCTGGCGCA TCGTGCCTAT GAAGACACCG CGCTGCCGAT CGGCAACAAC CAGACCATTT CCCAGCCTTA TATGGTGGCG CGCATGAGCG AGCTGCTGCT GGAAGCCGGG CCGCTGGATA AGGTGCTGGA GATCGGCACC GGATCCGGTT ACCAGACGGC AGTGTTGTCG CAGTTGGTCG AGCGGGTGTT CTCGGTAGAG CGCATCAAGG TGCTGCAGGA TCGGGCCAAG GAACGCCTGA TCGAGCTCAA CCTGCGCAAC GTGGTATTTC GCTGGGGCGA TGGTTGGGAA GGGTGGCCGG CGCTAGCGCC GTACAACGGC ATCATCGTCA CGGCGGTCGC CACCGATGTG CCTCAGGCTT TGCTTGATCA ACTGGCACCG GGTGGGCGGA TGGTGATCCC GGTCGGTTCG GGCGAAGTGC AGCAATTGAT GCTGATCGTG CGCGAAGAAA ACGGTTTCTC CCGACACGTT CTGGGGGCGG TGCGTTTCGT GCCATTGCTC AACGGTCCGC TGGCCTGA
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Protein sequence | MAREQDDRLR SGIGMTSQRT RERLIQRLYE EGVSNASVLE VIRRTPRHLF VDEALAHRAY EDTALPIGNN QTISQPYMVA RMSELLLEAG PLDKVLEIGT GSGYQTAVLS QLVERVFSVE RIKVLQDRAK ERLIELNLRN VVFRWGDGWE GWPALAPYNG IIVTAVATDV PQALLDQLAP GGRMVIPVGS GEVQQLMLIV REENGFSRHV LGAVRFVPLL NGPLA
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