| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1123 |
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| Symbol | ispD |
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| ID | 3716547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1300502 |
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| End bp | 1301209 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_346855 |
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| Protein GI | 77457350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.108373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGATT CCCTGCCGGC CTTCTGGGCC GTGATTCCTG CCGCGGGCGT CGGTGCCCGA
ATGGCCGCGG ACCGTCCCAA GCAATACCTG CAACTGGGCG GGCGCACAAT TCTCGAACAC
AGCCTCGGCT GTTTCCTCGA TCACCCGAGC CTCAAGGGCC TGGTGGTCAG TCTTGCCGTC
GATGATCCTT ATTGGCCGAA CCTGGCCAGC GCCAGTGATC CGCGAATTCA ACGGGTCGAC
GGTGGCACCG AACGTTCCGG CTCGGTACTC AATGCCTTGC TGCATCTGCA CGCCCAAGGT
GCCGACGACG AGGACTGGGT GCTGGTGCAC GATGCGGCGC GGCCCAATCT GAGCCGTGAC
GATCTCGACA AATTGCTCGC TGAGCTGGCG AACGATCCGG TCGGTGGTTT GCTGGCTGTG
CCGGCGAAGG ACACTCTCAA GCGGGTCGAC AAGCACGGTC GGGTGGTGGA AACCGTCGAT
CGCAGTGTGA TCTGGCAAGC CTATACGCCG CAGATGTTCC GCCTCGGTGC GCTGCACCGG
GCTTTGGCCG ACAGTCTCGT GGCGGTTGCA GTCATCACCG ATGAAGCTTC GGCGATGGAG
TGGGCTGGCA TGGCGCCGCG TCTGATCGAG GGCCGCGCGG ATAACTTGAA AGTCACCCGC
CCCGAAGACC TCGAATGGTT GCGTCAGCGC TGGACCAACC GTCGTTAA
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| Protein sequence | MIDSLPAFWA VIPAAGVGAR MAADRPKQYL QLGGRTILEH SLGCFLDHPS LKGLVVSLAV
DDPYWPNLAS ASDPRIQRVD GGTERSGSVL NALLHLHAQG ADDEDWVLVH DAARPNLSRD
DLDKLLAELA NDPVGGLLAV PAKDTLKRVD KHGRVVETVD RSVIWQAYTP QMFRLGALHR
ALADSLVAVA VITDEASAME WAGMAPRLIE GRADNLKVTR PEDLEWLRQR WTNRR
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