Gene Pfl01_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1120 
Symbol 
ID3716544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1297764 
End bp1298609 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_346852 
Protein GI77457347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.478156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA AGATCATCCG CGTCGGCGAC ATCGAGATTG CCAACGACAA ACCCATGGTG 
CTGTTCGGCG GCATGAACGT GCTGGAAAGC CGTGACATGG CCATGCAGGT TTGCGAAGAG
TACGTGAAGG TCACCGAAAA ACTCGGCATC CCTTACGTGT TCAAGGCCAG CTTCGACAAG
GCCAACCGTT CTTCTGTGAC CTCCTATCGC GGTCCTGGCC TGGAAGAGGG CATGCGCATC
TTCCAGGACA TCAAACAAGC CTTCGGCGTG CCGATCATCA CCGACGTCCA CGAGCCTGAC
CAGGCTGCGG TCGTCGCTGA GGTCTGCGAC ATCATCCAGC TGCCGGCCTT CCTGTCGCGC
CAGACCGATC TGGTCGTCGC GATGGCCAAG ACCAACGCTG TGATCAACAT CAAGAAAGCC
CAGTTCCTCG CGCCTCAGGA AATGAAACAC ATCCTGAACA AGTGCGTGGA AGCGGGTAAC
GATCAGTTGA TCCTCTGCGA GCGCGGTTCG AGCTTCGGCT ACAACAACCT CGTGGTCGAC
ATGCTCGGCT TCGGCATCAT GAAGCAGTTC GAGTACCCGG TATTCTTCGA CGTGACCCAT
TCGCTGCAAA TGCCGGGCGG TCGTTCCGAC TCCGCCGGCG GTCGCCGCGC CCAGGTCACC
GACCTGGCCA AGGCTGGCAT GAGCCAGTCG CTGGCGGGGC TGTTCCTCGA AGCGCACCCG
GACCCGGACA ACGCCAAATG CGACGGCCCT TGCGCCTTGC GTCTGGACAA ACTGGAGCCA
TTCCTGGCCC AGCTCAAAGC CCTGGACGAA CTGGTGAAGA GTTTTCCGAC GGTAGAAACC
GCGTAA
 
Protein sequence
MAQKIIRVGD IEIANDKPMV LFGGMNVLES RDMAMQVCEE YVKVTEKLGI PYVFKASFDK 
ANRSSVTSYR GPGLEEGMRI FQDIKQAFGV PIITDVHEPD QAAVVAEVCD IIQLPAFLSR
QTDLVVAMAK TNAVINIKKA QFLAPQEMKH ILNKCVEAGN DQLILCERGS SFGYNNLVVD
MLGFGIMKQF EYPVFFDVTH SLQMPGGRSD SAGGRRAQVT DLAKAGMSQS LAGLFLEAHP
DPDNAKCDGP CALRLDKLEP FLAQLKALDE LVKSFPTVET A