Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1120 |
Symbol | |
ID | 3716544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1297764 |
End bp | 1298609 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_346852 |
Protein GI | 77457347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.478156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGA AGATCATCCG CGTCGGCGAC ATCGAGATTG CCAACGACAA ACCCATGGTG CTGTTCGGCG GCATGAACGT GCTGGAAAGC CGTGACATGG CCATGCAGGT TTGCGAAGAG TACGTGAAGG TCACCGAAAA ACTCGGCATC CCTTACGTGT TCAAGGCCAG CTTCGACAAG GCCAACCGTT CTTCTGTGAC CTCCTATCGC GGTCCTGGCC TGGAAGAGGG CATGCGCATC TTCCAGGACA TCAAACAAGC CTTCGGCGTG CCGATCATCA CCGACGTCCA CGAGCCTGAC CAGGCTGCGG TCGTCGCTGA GGTCTGCGAC ATCATCCAGC TGCCGGCCTT CCTGTCGCGC CAGACCGATC TGGTCGTCGC GATGGCCAAG ACCAACGCTG TGATCAACAT CAAGAAAGCC CAGTTCCTCG CGCCTCAGGA AATGAAACAC ATCCTGAACA AGTGCGTGGA AGCGGGTAAC GATCAGTTGA TCCTCTGCGA GCGCGGTTCG AGCTTCGGCT ACAACAACCT CGTGGTCGAC ATGCTCGGCT TCGGCATCAT GAAGCAGTTC GAGTACCCGG TATTCTTCGA CGTGACCCAT TCGCTGCAAA TGCCGGGCGG TCGTTCCGAC TCCGCCGGCG GTCGCCGCGC CCAGGTCACC GACCTGGCCA AGGCTGGCAT GAGCCAGTCG CTGGCGGGGC TGTTCCTCGA AGCGCACCCG GACCCGGACA ACGCCAAATG CGACGGCCCT TGCGCCTTGC GTCTGGACAA ACTGGAGCCA TTCCTGGCCC AGCTCAAAGC CCTGGACGAA CTGGTGAAGA GTTTTCCGAC GGTAGAAACC GCGTAA
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Protein sequence | MAQKIIRVGD IEIANDKPMV LFGGMNVLES RDMAMQVCEE YVKVTEKLGI PYVFKASFDK ANRSSVTSYR GPGLEEGMRI FQDIKQAFGV PIITDVHEPD QAAVVAEVCD IIQLPAFLSR QTDLVVAMAK TNAVINIKKA QFLAPQEMKH ILNKCVEAGN DQLILCERGS SFGYNNLVVD MLGFGIMKQF EYPVFFDVTH SLQMPGGRSD SAGGRRAQVT DLAKAGMSQS LAGLFLEAHP DPDNAKCDGP CALRLDKLEP FLAQLKALDE LVKSFPTVET A
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