Gene Pfl01_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1105 
Symbol 
ID3716510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1278374 
End bp1279129 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID 
Productundecaprenyl pyrophosphate synthetase 
Protein accessionYP_346837 
Protein GI77457332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.177859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA CCAAGCAGAC TGCGCCGTCC ACGGTGCCGC GCCATGTCGC GATCATCATG 
GATGGCAATA ATCGCTGGGC GAAAAAACGC TTTATGCCGG GTGTCGCCGG GCATAAGGCT
GGCGTGGATG CTGTGCGGGC GGTGATCGAG GTGTGTGCCG AGGCCAAGGT CGAAGTGCTC
ACCCTGTTCG CCTTTTCCAG TGAAAACTGG CAGCGTCCGG CTGACGAGGT CAGCGCCTTG
ATGGACCTGT TCTTCAAGGC GCTGCGTCGT GAAGCCAAGC GCCTGAACGA CAACAACATC
AGTCTGCGCA TCATCGGCGA CCGTACGCGG TTTCATCCCG AGCTTCAGGC AGCCATGCGT
GAAGCAGAAG CGATGACCGC TGGTGCCAAC CGCTTCATTC TGCAGATCGC CGCCAATTAC
GGCGGTCAGT GGGACATTGC GCAAGCGGCG CAGCGTCTGG CGCGTGAAGT TCAGGCGGGT
CATCTGCGAC CGGAAGACAT CACGCCGGAT CTGCTGCAGA CCTGTCTGGT CACTGGTGAT
CTGCCGTTGC CCGACCTGTG CATCCGCACC GGCGGCGAGC ATCGCATCAG CAACTTCCTC
TTGTGGCAGT TGGCTTACGC CGAGTTGTAC TTCTCCGACC TGTTCTGGCC GGACTTCAAA
CACGAAGCCA TGCGCAATGC GCTGGTCGAT TTCGCTTTGC GCCAGCGTCG CTTCGGTAAA
ACGAGCGAGC AGGTCGAAGC TGGAGCCCGG GTTTAA
 
Protein sequence
MDKTKQTAPS TVPRHVAIIM DGNNRWAKKR FMPGVAGHKA GVDAVRAVIE VCAEAKVEVL 
TLFAFSSENW QRPADEVSAL MDLFFKALRR EAKRLNDNNI SLRIIGDRTR FHPELQAAMR
EAEAMTAGAN RFILQIAANY GGQWDIAQAA QRLAREVQAG HLRPEDITPD LLQTCLVTGD
LPLPDLCIRT GGEHRISNFL LWQLAYAELY FSDLFWPDFK HEAMRNALVD FALRQRRFGK
TSEQVEAGAR V