Gene Pfl01_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1100 
Symbol 
ID3716505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1273902 
End bp1274684 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID 
Productmethionine aminopeptidase 
Protein accessionYP_346832 
Protein GI77457327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.479841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CCCTCAAAAC TCCCGAGGAC ATCGCTGGCA TGCGTGTCGC CGGCAAACTG 
GCCGCCGATG TGCTGGAAAT GATTGCCGAA CACGTAAAAC CGGGCGTGAC CACCGATGAG
CTGAACCAGA TCTGCCACGA CTATATCGTC GACGTGCAGA AAGCCATCCC TGCCCCGCTC
AACTACAAGG GCTACCCGAA GTCGATCTGT ACCTCGATCA ACCATGTGGT CTGCCACGGC
ATCCCGAACG ACAAGCCGCT GAAAAACGGC GACACCCTGA ACATCGACGT CACCGTGATC
AAGGACGGCT ACCACGGCGA CACCAGCCGC ATGTTCCACG TCGGCACCGT GCCGGTCTGG
GCCGAGCGCC TGTCGCAAGT CACCCAGGAG TGCATGTACA AGGCGATCGA AATCGTCAAA
CCCGGCTGCC GCCTCGGTGA CATCGGCGAA ATCATCCAGA AGCACGCGGA AAAGAACGGC
TTCTCGGTGG TGCGCGAGTT CTGCGGCCAT GGCATCGGCA AGGTATTCCA CGAAGAACCG
CAAATCCTGC ACTACGGTCG CGCCGGCACC GGCATGGAAC TGAAGGCCGG CATGACCTTT
ACCATCGAAC CGATGATCAA CCAGGGCAAG GCCGACACCA AAGTACTGGG CGACGGCTGG
ACCGCGATCA CCAAGGATCG CAAGCTGTCA GCACAGTGGG AACACACTTT GCTTGTCACC
GACACCGGCT ACGAGATCTT CACCCTGCGC AGCGACGACA CCATCCCGCG CATCTCGGCC
TGA
 
Protein sequence
MTVTLKTPED IAGMRVAGKL AADVLEMIAE HVKPGVTTDE LNQICHDYIV DVQKAIPAPL 
NYKGYPKSIC TSINHVVCHG IPNDKPLKNG DTLNIDVTVI KDGYHGDTSR MFHVGTVPVW
AERLSQVTQE CMYKAIEIVK PGCRLGDIGE IIQKHAEKNG FSVVREFCGH GIGKVFHEEP
QILHYGRAGT GMELKAGMTF TIEPMINQGK ADTKVLGDGW TAITKDRKLS AQWEHTLLVT
DTGYEIFTLR SDDTIPRISA