| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1099 |
|---|
| Symbol | glnD |
|---|
| ID | 3716504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1271159 |
|---|
| End bp | 1273861 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_346831 |
|---|
| Protein GI | 77457326 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.30098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGG TGGATCCCGA ACTCTTCGAC CGCGGCCAGT TCCAGGCTGA ACTGGCCCTG
AAAGCGAGTC CCATCGCGGC GTTCAAGAAG GCGATCCGCC AGGCCCGCGA AGTGCTCGAT
GCACGTTTTC GGGCCGGTCG CGACATCCGC CGGCTGATCG AAGACCGGGC GTGGTTCGTC
GACAACATCC TGCAAAAGGC CTGGGACCAG TTCGACTGGA GCGAAGACGC CGACATCGCG
CTGGTCGCGG TCGGCGGCTA CGGTCGCGGT GAGCTGCACC CCTACTCCGA CATCGATCTG
CTGATCCTGC TGGACAGCGC CGACCACGAA ATCTTCCGCG ATTCCATCGA GCGCTTTCTG
ACGCTGCTGT GGGATATCGG CCTGGAAGTC GGTCAGAGCG TTCGCTCGGT CGACGAATGC
GCCGAAGAGG CCCGCGCCGA CCTGACGGTG GTCACCAACC TGATGGAAAG CCGCACCATC
TGCGGCCCCG AGCGCCTGCG CCAGCGCATG CTCGATGTCA CCAGCACTGC GCACATGTGG
CCAAGCAAGG ATTTCTTTCT GGCCAAGCGC GCCGAGCAGA AGGCTCGCCA CCACAAGTAC
AACGACACCG AATACAACCT GGAACCCAAC GTCAAAGGCT CGCCCGGCGG ACTACGGGAT
ATTCAGACAA TTCTGTGGGT AGCCCGTCGT CAGTACGGCA CCCTGAACCT GCGCGCCCTG
GCCGGCGAAG GCTTTCTGGT CGAGAGTGAA AACGCCTTGC TCGCGTCCTC CCAGGAATTC
CTCTGGAAGG TGCGTTACGC CCTGCACATG CTGGCCGGTC GCTCCGAGGA CCGCCTGCTG
TTCGATCACC AGCGCACCAT TGCCGGGCTG CTGGGGTTTG AAGGCGACGA CGCCAAACAG
GCCGTCGAAA ACTTCATGCA GCAGTATTTC CGGGTGGTGA TGAGCATCGC CCAGCTCAGC
GACCTGATCA TTCAGCACTT CGAGGAAGTC ATCCTCGCCC CGGAAGACGA AGCGCCGCCG
CAGCCGATCA ACTCGCGCTT CCAGCTGCAC GACGGTTACA TCGAGGCACG CAACGACAAC
GTGTTCCGCC GCACGCCGTT CGCCATGCTC GAGATCTTCG TGCTGATGGC CCAGCAGCCG
GAAATCAAAG GCGTACGCGC CGACACCATT CGTCTGCTGC GGGAAAACCG TCACCTGATC
GACGACAACT TCCGCAACGA CATCCGCAAC ACCAGCCTGT TCATCGAGCT GTTCAAGTGC
AAGATCGGCA TCCACCGCAA CCTGCGGCGG ATGAACCGTT ACGGCATTCT CGGGCGCTAT
CTGCCGGAGT TCGGCTTCAT CGTCGGGCAG ATGCAGCACG ACCTGTTCCA CATCTATACG
GTCGATGCGC ACACGCTGAA CCTGATCAAA CACCTGCGCA AGTTGCAGTA CACCCAGGTG
TCGGAGAAAT TCCCGCTGGC CGCCAAGCTC ATGGCCAAAC TGCCGAAGCC TGAACTCATT
TATATGGCCG GCCTGTACCA CGACATCGGC AAGGGCCGGC ATGGCGATCA CTCGGAAATT
GGCGCAGTGG ATGCCGAGGC GTTCTGCCAG CGCCACCAAC TGCCGGTGTG GGACAGCCGC
CTGATCGTGT GGCTGGTGCA GAACCACCTG GTGATGTCGA CCACCGCCCA GCGCAAGGAT
TTGTCCGACC CGCAGGTGAT CCATGACTTC GCCCTGGCGG TCGGTGACGA AACCCGTCTC
GACTACCTGT ACGTCCTGAC CGTGGCCGAC ATCAACGCGA CCAACCCGAC CCTCTGGAAC
TCGTGGCGTG CCAGCCTGTT GCGCCAGCTC TACACCGAAA CCAAGCGTGC CCTGCGCCGT
GGCCTGGAGA ATCCGGTGGA TCGCGAAGAG CAGATCCGCC AGACCCAGAG CGCAGCGCTG
GACATACTGG TACGCGGCGG CACCGATCCG GATGACGTCG AGCAATTGTG GGCGCAACTG
GGCGATGACT ACTTCCTGCG CCACACCGCC GGCGACGTGG CCTGGCACAC CGACGCGATC
CTTCAGCAAC CGGCAGACGG CGGTCCGCTG GTGCTGATCA AGGAAACCAC CCAGCGCGAA
TTCGAGGGCG GCACGCAGAT CTTCATCTAT GCGCCGGACC AACACGACTT CTTCGCCGTG
ACCGTGGCCG CGATGGACCA GCTCAACCTG AACATTCACG ACGCCCGGGT CATCACATCC
AGCAGCCAGT TCACCCTCGA TACCTACATC GTGCTCGACA CCGATGGCGA CTCGATCGGC
GACAATCCGG TCCGGGTCAA GCAGATTCGC GACGGCCTGA CCGAAGCCCT GCGCAACCCG
GCCGACTACC CGACGATCAT CCAGCGTCGA GTGCCGCGCC AGCTCAAGCA TTTCGCATTC
GCCCCGCAGG TGACGATCCA CAACGATGCC CAGCGCCCGG TGACGGTGCT GGAACTCACG
GCACCCGATC GCCCGGGCCT GCTGGCACGG GTCGGCGGGA TTTTCCTCGA ATTCGACCTG
TCGCTGCAGA ACGCCAAGAT CGCCACCCTG GGCGAGCGGG TGGAAGACGT GTTCTTCATC
ACCGACGCCC ACAATCAACC GCTGTCCGAC CCGCTGCTGT GCAGCCGTTT GCAGGATGCC
ATCGTCGAAC AGCTGAGCGT CAATCAGGAA CCCGATATCA AACTGTCGCG CATCAGCATT
TGA
|
|---|
| Protein sequence | MPQVDPELFD RGQFQAELAL KASPIAAFKK AIRQAREVLD ARFRAGRDIR RLIEDRAWFV
DNILQKAWDQ FDWSEDADIA LVAVGGYGRG ELHPYSDIDL LILLDSADHE IFRDSIERFL
TLLWDIGLEV GQSVRSVDEC AEEARADLTV VTNLMESRTI CGPERLRQRM LDVTSTAHMW
PSKDFFLAKR AEQKARHHKY NDTEYNLEPN VKGSPGGLRD IQTILWVARR QYGTLNLRAL
AGEGFLVESE NALLASSQEF LWKVRYALHM LAGRSEDRLL FDHQRTIAGL LGFEGDDAKQ
AVENFMQQYF RVVMSIAQLS DLIIQHFEEV ILAPEDEAPP QPINSRFQLH DGYIEARNDN
VFRRTPFAML EIFVLMAQQP EIKGVRADTI RLLRENRHLI DDNFRNDIRN TSLFIELFKC
KIGIHRNLRR MNRYGILGRY LPEFGFIVGQ MQHDLFHIYT VDAHTLNLIK HLRKLQYTQV
SEKFPLAAKL MAKLPKPELI YMAGLYHDIG KGRHGDHSEI GAVDAEAFCQ RHQLPVWDSR
LIVWLVQNHL VMSTTAQRKD LSDPQVIHDF ALAVGDETRL DYLYVLTVAD INATNPTLWN
SWRASLLRQL YTETKRALRR GLENPVDREE QIRQTQSAAL DILVRGGTDP DDVEQLWAQL
GDDYFLRHTA GDVAWHTDAI LQQPADGGPL VLIKETTQRE FEGGTQIFIY APDQHDFFAV
TVAAMDQLNL NIHDARVITS SSQFTLDTYI VLDTDGDSIG DNPVRVKQIR DGLTEALRNP
ADYPTIIQRR VPRQLKHFAF APQVTIHNDA QRPVTVLELT APDRPGLLAR VGGIFLEFDL
SLQNAKIATL GERVEDVFFI TDAHNQPLSD PLLCSRLQDA IVEQLSVNQE PDIKLSRISI
|
|---|
| |