Gene Pfl01_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1092 
Symbol 
ID3716497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1263565 
End bp1264857 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content64% 
IMG OID 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_346824 
Protein GI77457319 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCG ACCGATCGTC ATCGCGGGCA AGCCCGCTCC CACAGGGTTC GGCGTTAACC 
CGCCCATCTT CACCAGGGCT TGAAACCGTG ATGATTCCCT CCCCCTGGCG CGCCGATTTC
CCGGCCATCG CCGCCCTGCA ACGGCAAGAC CAGACTTACC TGGACAACGC CGCCACCACG
CAAAAACCCC AGGCCTTGCT CGACGCGCTG GCGCATTACT ACGCCAACGG CGCAGCCAAC
GTGCATCGTG CCCAGCACTT GCCCGGCGCC CATGCCACGC AGGCGTTCGA GGACAGCCGC
CTGAAGGTTG CCCAGTGGCT GAATGCCGGT GACAGCGGGC AGATCATCTT TACCCACGGC
GCCACCAGCG CGCTGAATCT CCTGGCTTAC GGCCTGGAAC ATCTTCTCCA TCCGGGCGAT
GAAATTGTCA TCAGCGCCCT GGAGCATCAC GCCAACCTGC TGCCTTGGCA GCAACTGGCA
CAACGTCGCG AACTCAAACT GGTGATCCTG CCGCTGGACG ATGACGGCGT GATCGACCTC
GCCGCCGCCG TTCACCTGAT CGGCCCGCGC ACTCGCTTGC TGGCGGTCAG TCAGTTGTCC
AACGTGCTTG GTGCCTGGCA ACCGTTGCCG GCATTGTTGG CGATGGCCAA AGCACACAAC
GCGCTGACCG TGGTCGATGG CGCTCAAGGC GTGGTCCACG GCCGGCATGA CGTGCAGGCG
CTGGGTTGCG ACTTTTACGT GTTTTCCAGC CACAAGCTGT ACGGCCCCGA TGGCCTCGGC
GTGCTGTTCG GGTGCAACGC AGCGCTTGAG CAACTGCGCC CGTGGCAATT TGGTGGCGAG
ATGGTGCTGG AAGCCAATTA TCACGACGCT CGTTTTCGTC CGGCGCCACT GGGCTTCGAG
GCCGGAACGC CACCGATTGC CAGCGTGATC GGCCTGGGTG CGACCCTCGA CTACCTGGCC
GGTCTGGATC AGGACGCCGT GTCCGCCCAC GAAGCCGCGC TGCACGATTA CCTTTTGCGA
GGCCTCGCCG CCCGCAATGG CATCCGTCTG CTGGGCAAGC CGCAACTGGC GCTGGCCAGT
TTTGTCGTCG AAGGCGTGCA CAACGCCGAT CTGGCGCATT TGCTGACCGA GCAAGGCATC
GCCGTGCGTG CCGGGCATCA CTGCGCGATG CCGTTGCTCA AGCGCTTTGA ACTGGCCGGG
GCCATCCGCG TGTCGCTGGC GCTGTACAAC GATTCCGAGG ATCTGGAGCG GTTCTTTGAG
GCGCTGGATC AGGCGTTGGA GTTGTTGCGA TGA
 
Protein sequence
MAFDRSSSRA SPLPQGSALT RPSSPGLETV MIPSPWRADF PAIAALQRQD QTYLDNAATT 
QKPQALLDAL AHYYANGAAN VHRAQHLPGA HATQAFEDSR LKVAQWLNAG DSGQIIFTHG
ATSALNLLAY GLEHLLHPGD EIVISALEHH ANLLPWQQLA QRRELKLVIL PLDDDGVIDL
AAAVHLIGPR TRLLAVSQLS NVLGAWQPLP ALLAMAKAHN ALTVVDGAQG VVHGRHDVQA
LGCDFYVFSS HKLYGPDGLG VLFGCNAALE QLRPWQFGGE MVLEANYHDA RFRPAPLGFE
AGTPPIASVI GLGATLDYLA GLDQDAVSAH EAALHDYLLR GLAARNGIRL LGKPQLALAS
FVVEGVHNAD LAHLLTEQGI AVRAGHHCAM PLLKRFELAG AIRVSLALYN DSEDLERFFE
ALDQALELLR