Gene Pfl01_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1080 
Symbol 
ID3716485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1247671 
End bp1250739 
Gene Length3069 bp 
Protein Length1022 aa 
Translation table11 
GC content62% 
IMG OID 
Productacriflavin resistance protein 
Protein accessionYP_346812 
Protein GI77457307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.756494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTCA ATCTTTCCGC CTGGGCGCTG CGCAATCGCC AGATCGTACT GTTCCTGATG 
CTTTTGCTGG CGATCGTCGG CGCCTTGTCC TACACCAAGC TCGGCCAGAG CGAAGACCCG
CCGTTCACCT TCAAGGCGAT GGTCATTCAG ACCCGCTGGC CGGGCGCCAC GGCCCAGGAA
GTTTCGCGTC AGGTCACCGA GCGCATCGAA AAGAAGCTGA TGGAAACCGG CGAGTACGAG
CGCATTGTCT CGTTCTCGCG TCCCGGTGAA TCCCAAGTCA CGTTCATTGC CCGCGACTCC
ATGCATTCGG TAGAGATTCC GGATCTCTGG TACCAGGTGC GCAAGAAAGT CAGCGACATT
CGCCAGACCT TGCCGCCGGG GATTCAGGGG CCGTTTTTCA ACGATGAATT CGGCACCACT
TTCGGCAATA TCTATGCGCT GACCGGCGAC GGTTTCGACT ACGCGGTGCT CAAGGATTAC
GCTGACCGCA TCCAGATCCA GCTGCAGCGG GTCAAGGATG TGGGCAAGGT TGACTTGCTT
GGTTTGCAGG ACGAGAAGGT CTGGGTCGAA TTGTCCAATG TCAAACTCGC CACCCTCGGC
TTGCCGCTGG CGGCGGTGCA GCAGGCGCTG GAAGAACAGA ACGCCGTGTC CACCGCCGGT
TTCTTCGAAA CCGGCAGCGA GCGATTGCAG CTACGGGTTT CGGGGAATTT TCAGACAGTC
GACGAGATCA AGAACTTCCC GATCCGGGTC GGTGATCGTA CGTTCCGTAT CTCCGATGTC
GCCGACGTGC GGCGTGGTTT CAACGATCCT CCGGCGCCGC GCATGCGCTT CATGGGCGAA
GACGCCATCG GTCTCGCGGT GGCGATGAAG GACGGCGGCG ACATTCTGGT GCTGGGCAAG
GCCCTGGAAA TCGAATTCGC CCGGATCCAG AAAAACCTGC CGGCCGGCAT GCAATTGCGC
AAGGTCTCCG ACCAGCCCGC CGCCGTGAAA ACCGGTGTCG GCGAGTTCGT TCAGGTGCTG
GTCGAAGCGC TGGCCATCGT GTTGCTGGTG AGCTTCTTCT CCCTCGGCGT GCGCACCGGC
ATGGTGGTGG CGCTGACCAT TCCGCTGGTG CTGGCGATGA CCTTCGCCTG CATGTATTAC
CTCGGCATCG GCCTGCACAA GATTTCCCTC GGCGCGCTGG TGCTCGCACT GGGCCTGCTG
GTGGACGACG CAATCATCGC CGTGGAAATG ATGGCGATCA AAATGGAGCA GGGCTTCGAC
CGGATCAAGG CTGCCAGTTA CGCCTGGACC AGCACCGCGT TCCCGATGCT CACCGGTACG
CTGATCACCG CCGCCGGTTT CCTGCCGATC GCCACGGCGC AGTCCGGTAC CGGCGAATAC
ACCCGCTCGA TCTTCCAGGT GGTGACCATC GCCTTGCTCG CATCCTGGGT GGCCGCCGTG
GTGTTCGTGC CCTATCTGGG GGAAAAACTC CTGCCGGATC TGGCGAAAAT TCACGCGGCC
AAACACGGTA CGGCGGACGG CCAGACCGAT CCCTACGGCA CGCCGTTCTA CCAACGGGTG
CGGCGTCTGG TGGAGTGGTG TGTGCGTCGG CGCAAAACCG TGATCGTGCT CACCGTGCTG
CTGTTCGTGG CGTCGGTGGC GTTGTTCCGG TTCGTGCCGC AGCAGTTCTT CCCGGCTTCC
GGCCGTCTGG AGCTGATGGT CGATCTGAAG CTCGCCGAGG GCGCCTCGCT GGCCAATACC
ACGGGTGAGG TCAAACGCCT GGAAGCGATG CTCAAGGATC ACGCTGGCAT CGATAACTAC
GTCGCTTACG TCGGCACCGG TTCGCCACGT TTCTACCTGC CGCTGGATCA ACAACTGCCG
GCGGCGAGCT TCGCCCAGTT CGTCGTGCTG GCGAAAACCA TCGAGGAACG CGAAACGCTG
CGCACGTGGC TGATCGACAC CTTGAACGAG CAGTTCCCGG CCCTGCGCTC GCGGGTCACG
CGTCTGGAGA ACGGTCCTCC GGTTGGCTAC CCGGTGCAGT TCCGCGTCAC TGGTGAGCAC
ATTGAGGAAG TTCGTGCGCT GGCCCGAAAA GTCGCGGCCA AGGTGCGCGA GAACCCGCAT
GTGGTGAACG TGCATCTGGA CTGGGAAGAG CCGAGCAAGG TCGTGTACCT GAACATCGAT
CAGGATCGCG CCCGGGCCCT GGGTGTGAGC ACGGCGAATC TGGCGAAATT CCTCCAGAGT
TCGCTGACCG GATCCAGCGT CAGCCAGTAC CGCGAGGACA ACGAACTGAT CGAAATCCTT
TTGCGCGGAA CCGTGCACGA GCGCACCGAA CTGTCGTTGC TGCCGAGTCT GGCGGTGCCC
ACCGATAACG GTCGCAGCGT CGCGCTGTCG CAGATTGCCA CGCTGGAATA TGGCTTCGAG
GAAGGCATCA TCTGGCACCG CAATCGCCTG CCGAACGTAA CCGTGCGCGC GGACATTTAC
GGCAAGGAGC AACCGGCGAC GCTGGTGAAG CAGATCCTGC CGACGCTTGA TCCGATCCGC
GCCGAATTGC CGGACGGTTA TCTGCTGGAT GTCGGCGGTA CCGTGGAGGA TTCGGAGCGT
GGGCAGAAGT CGGTGAATGC GGGCGTGCCG ATGTTCATTG TCGTGGTGCT GACGTTGCTG
ATGGTGCAGT TGCGCAGTTT TTCGCGCACG GCGATGGTGT TTCTGACCGC GCCGCTGGGG
TTGATCGGGG TGACGCTGTT TCTGCTGGTG TTCCGTCAGC CGTTCGGGTT TGTGGCGATG
CTCGGGACGA TCGCGCTGTC GGGGATGATC ATGCGTAACT CGGTGATTCT GGTGGATCAG
ATCGAGCAGG ACATCGCCGC CGGGCTCAAG CCGTGGCAGG CGATTATCGA GGCGACCGTG
CGGCGGTTTC GGCCGATTGT GCTGACGGCG CTGGCAGCGG TGCTGGCGAT GATTCCGCTT
TCTCGCAGTG TGTTTTTCGG GCCGATGGCG GTGGCGATCA TGGGCGGGTT GATTGTTGCT
ACGGCGTTGA CGCTTTTGTT TTTGCCGGCG TTGTATGCGG CTTGGTTCCG GGTTCGCAAG
GAGGCTTGA
 
Protein sequence
MGFNLSAWAL RNRQIVLFLM LLLAIVGALS YTKLGQSEDP PFTFKAMVIQ TRWPGATAQE 
VSRQVTERIE KKLMETGEYE RIVSFSRPGE SQVTFIARDS MHSVEIPDLW YQVRKKVSDI
RQTLPPGIQG PFFNDEFGTT FGNIYALTGD GFDYAVLKDY ADRIQIQLQR VKDVGKVDLL
GLQDEKVWVE LSNVKLATLG LPLAAVQQAL EEQNAVSTAG FFETGSERLQ LRVSGNFQTV
DEIKNFPIRV GDRTFRISDV ADVRRGFNDP PAPRMRFMGE DAIGLAVAMK DGGDILVLGK
ALEIEFARIQ KNLPAGMQLR KVSDQPAAVK TGVGEFVQVL VEALAIVLLV SFFSLGVRTG
MVVALTIPLV LAMTFACMYY LGIGLHKISL GALVLALGLL VDDAIIAVEM MAIKMEQGFD
RIKAASYAWT STAFPMLTGT LITAAGFLPI ATAQSGTGEY TRSIFQVVTI ALLASWVAAV
VFVPYLGEKL LPDLAKIHAA KHGTADGQTD PYGTPFYQRV RRLVEWCVRR RKTVIVLTVL
LFVASVALFR FVPQQFFPAS GRLELMVDLK LAEGASLANT TGEVKRLEAM LKDHAGIDNY
VAYVGTGSPR FYLPLDQQLP AASFAQFVVL AKTIEERETL RTWLIDTLNE QFPALRSRVT
RLENGPPVGY PVQFRVTGEH IEEVRALARK VAAKVRENPH VVNVHLDWEE PSKVVYLNID
QDRARALGVS TANLAKFLQS SLTGSSVSQY REDNELIEIL LRGTVHERTE LSLLPSLAVP
TDNGRSVALS QIATLEYGFE EGIIWHRNRL PNVTVRADIY GKEQPATLVK QILPTLDPIR
AELPDGYLLD VGGTVEDSER GQKSVNAGVP MFIVVVLTLL MVQLRSFSRT AMVFLTAPLG
LIGVTLFLLV FRQPFGFVAM LGTIALSGMI MRNSVILVDQ IEQDIAAGLK PWQAIIEATV
RRFRPIVLTA LAAVLAMIPL SRSVFFGPMA VAIMGGLIVA TALTLLFLPA LYAAWFRVRK
EA