Gene Pfl01_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1063 
Symbol 
ID3716212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1232005 
End bp1233282 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346795 
Protein GI77457290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.239889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATT ACCAGCAGAC GATACGCATT CTGTCCGATC GCATAGTGCT GGCGCAGACG 
CCGATCCGCG TGCTCGACGC GGTCAAGTGG GACGAGAACA TCCGCAAGGG GTTCCTCAAG
GCCAAGGGCA AGGAATTGCC GGCGGTGGAT CGCGACTACT ACCTCAATCG GCCTCTGTCT
TTCGATTCGA GCAAGGTCAA ACTGGAATTC CAGAACATCG AACGGGACAT CACCCGTCAG
CTCGGCCAGT TCAACCCGGT CGGCCAGATC ATGCGCCGCA TGTGCAAGGA ATACCGGATG
GTGGTGCGCA TGCTCGAAGC GCGCGGCACC GAAGATTTCG GTCTGATTTC CCAGGAATTG
TACGGCGCCG CGTCTGATGC GTTTCACGCC GGTGACCCGA CCCTGGCCGA CCTTGGCCTG
ATGATGTCGG ACTATCTGAA CAACATCGAC GGTCGTGGCG ACCTGAAGGA CGAACCGAAG
ACCCTTACCG CCAAGGACGC CGTTCACCTG CTGCAAACCC GCCTGAACAA GGTGTTCGGC
GAGGCTGAAG AAACCATCCG GGTGTTTGAG TCCGACGGTA TCGTCGCCGA TGCGGCAGCG
GGTGCCGACT ACATCAAGAT CCGCACCGAC GCGATGTTCA ACGACCGTGA CGTGCGCGCG
CTGGAAGTCC ACGAAGGGCT GGTGCACGTC GGCACCACGC TCAACGGTTT GAACCAGCCG
ATCTGCACCT TCCTGTCCAA GGGCCCGCCC TCGTCGACGG TGACTCAGGA AGGCCTGGCG
ATCCTGATGG AAATCATCAC CTTCGCCTCC TACCCCAGCC GCCTGCGCAA ACTGACCAAC
CGCACCCGCG CCATTCACAT GGTCGAGGAG GGCGCGGACT TCCTGCAGAT TTTCGAGTTC
TTCCGCGAGC AGGGCTTCGA GATGGCGGAA AGCTACGGCA ACGCCAGTCG GGTTTTCCGT
GGCTCGACGC CGACCGGTCT GCCATTCACC AAAGACTTGT CCTACCTCAA GGGCTTCATC
ATGGTTTACA ACTACATTCA GTTGGCCGTG CGCAAGGGCA AGCTCGAGCA GATCCCGCTG
TTGTTCTGTG GCAAGACCAC GTTGGAAGAC ATGCGAACCC TGCGTCAGCT GGTGGACGAA
GGCCTGGTGG TGCCGCCCAA GTACCTGCCG GACCAGTTCC GTGACATGAA CGCGTTGTCG
GCGTGGATGT GCTTCTCCAA CTTCCTCAAT CACTTGAGCC TGGACCGGAT CGAGGCCGAT
TACTCCAACA TCCTGTAG
 
Protein sequence
MDDYQQTIRI LSDRIVLAQT PIRVLDAVKW DENIRKGFLK AKGKELPAVD RDYYLNRPLS 
FDSSKVKLEF QNIERDITRQ LGQFNPVGQI MRRMCKEYRM VVRMLEARGT EDFGLISQEL
YGAASDAFHA GDPTLADLGL MMSDYLNNID GRGDLKDEPK TLTAKDAVHL LQTRLNKVFG
EAEETIRVFE SDGIVADAAA GADYIKIRTD AMFNDRDVRA LEVHEGLVHV GTTLNGLNQP
ICTFLSKGPP SSTVTQEGLA ILMEIITFAS YPSRLRKLTN RTRAIHMVEE GADFLQIFEF
FREQGFEMAE SYGNASRVFR GSTPTGLPFT KDLSYLKGFI MVYNYIQLAV RKGKLEQIPL
LFCGKTTLED MRTLRQLVDE GLVVPPKYLP DQFRDMNALS AWMCFSNFLN HLSLDRIEAD
YSNIL