Gene Pfl01_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1058 
Symbol 
ID3716207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1226630 
End bp1227631 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_346790 
Protein GI77457285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0856452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.699737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACT TACAGATCGA TGACATCAAA ACCGACGAGA ACGCCGCCAT GGTGTTGTTG 
GTGGACGATC AGGCGATGAT CGGCGAAGCC GTGCGCCGTG GGCTGTCGAA TGAAGAGAAC
ATCGACTTCC ATTTCTGCTC CGACCCGCAT CTTGCCGTGG CCCACGCGGT GCGGATCAAA
CCCACCGTGA TCCTGCAGGA TCTGGTGATG CCCGGCCTCG ACGGTCTGAG CCTGGTGCGC
GAATACCGCA ATCACCCGGC GACCAAGGAC ATTCCGATCA TCGTCCTCTC GACCAAGGAA
GACCCGCTGA TCAAGAGCGC GGCGTTCTCC GCCGGGGCCA ACGATTACCT GGTGAAACTG
CCGGACAACA TCGAACTGGT GGCGCGCATC CGCTATCACT CACGCTCCTA CATGACGTTG
CTGCAACGGG ACGCGGCCTA TCGCGCGTTG CGGGTCAGCC AGCAGCAATT GCTCGACACC
AATCTGGTGT TGCAGCGCCT GATGAACTCC GACGGCCTGA CCGGACTGTC CAACCGCCGG
CATTTCGACG AATACCTGGA GCTGGAATGG CGCCGCTCGC TGCGTGACCA GAGCCAGTTG
TCGCTGCTGA TGATCGACGT CGATTACTTC AAGTCCTACA ACGACACGTT CGGGCACGTC
GAAGGCGACG AAGCGTTGCG CAAGGTTGCT ACGGCGATTC GCGAAGCCAG TGCCCGGCCG
TCCGACCTGC CGGCGCGTTA TGGCGGCGAA GAGTTTGCGC TGGTGCTGCC CAACACCTCG
CCGGGCGGGG CACGGCTGGT GGCGGAAAAG CTGCGCCAGA CGGTCGCGGC GCTGAAGATT
CCGCACAATG CCCCGGCCGA AGGATCGAGC CTGACCATCA GCATCGGCCT GGCGACCATG
GTGCCGGAGT CGGGCAGCGA CTGCCGGTTG CTGATCTCGG CGGCGGACCG CGGCCTGTAC
CTGGCCAAGA ACAACGGGCG CAATCAGGTG GGGATTGAAT GA
 
Protein sequence
MNDLQIDDIK TDENAAMVLL VDDQAMIGEA VRRGLSNEEN IDFHFCSDPH LAVAHAVRIK 
PTVILQDLVM PGLDGLSLVR EYRNHPATKD IPIIVLSTKE DPLIKSAAFS AGANDYLVKL
PDNIELVARI RYHSRSYMTL LQRDAAYRAL RVSQQQLLDT NLVLQRLMNS DGLTGLSNRR
HFDEYLELEW RRSLRDQSQL SLLMIDVDYF KSYNDTFGHV EGDEALRKVA TAIREASARP
SDLPARYGGE EFALVLPNTS PGGARLVAEK LRQTVAALKI PHNAPAEGSS LTISIGLATM
VPESGSDCRL LISAADRGLY LAKNNGRNQV GIE