| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1056 |
|---|
| Symbol | |
|---|
| ID | 3716205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1223280 |
|---|
| End bp | 1225574 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | CheA Signal transduction histidine Kinases (STHK) |
|---|
| Protein accession | YP_346788 |
|---|
| Protein GI | 77457283 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.355241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.810589 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG AGCAAATGCG CGACGCCTCC TTGCTCGAGC TGTTCAGCCT CGAAGCCGAA
GCCCAGACCC AGGTGCTCAG CGCCGGGCTG CTGGCGCTGG AGCGCAATCC GACCCAGGCC
GATCAGCTCG AATCGTGCAT GCGCGCGGCG CACTCGTTGA AAGGCGCGGC GCGGATCGTC
GGCATCGACA GCGGCGTCAG CGTCGCCCAC GTGATGGAAG ATTGCCTGGT CAGTGCGCAG
GAGGGGCGGT TGTTCCTGCG TCCGGAGCAT ATCGACGCGT TGTTGCAGGG CACCGATTTG
CTGATGCGCA TCGCCACCCC GGCCAACGGC CCGCAACCGG CGGACATCGA GGCTTATGTG
GCGTTGATGG GCGGTTTGCT CGACCCGGCG GCACCGGCCG TGGTGCCCGC CGCTCAGAGC
GCACCGCCGA TGGCCGAGTT TCAGCTTCAG CCACTGCCGG TGGTTGAGCC AGCGCCGGTT
GAAGTCTCGG TCGAGGTGAC CGAGCCGGAG CCCGCGCCGC GCAAGAGCAA ACGCACCACT
GAAGGTGGCG AGCGGGTGCT GCGGGTCACC GCCGAACGCC TGAACAGCCT GCTCGACCTG
TCGAGCAAAT CCCTGGTGGA AACCCAGCGC CTCAAGCCGC ACCTGGCCAC CATGCAGCGC
CTCAAACGCA TGCAGAACAA CGGCCTGCGG GCGCTGGAAA GTCTTAACGT TCATCTCAAG
GAACACGCCC TGAGCCTTGA AGCTCAAGAG GCGCTGGAAG ACGCGCGACG TTTGCTCGCC
GAATCCCAGC AGTTGCTGGC AGAGAAAAAC GCCGAACTCG ACGAGTTTGC CTGGCAGGCG
AGTCAGCGTG CGCAAGTGCT CTATGACACC GCGCTGGCCT GCCGCATGCG GCCGTTCGCC
GATGTGCTGT CGGGTCAGGT GCGGATGGTG CGCGACCTCG GCCGCAGCCT CGGCAAGCAG
GTGCGGCTGG AGATCGAGGG CGAGAAGACT CAGGTCGACC GCGATGTACT GGAAAAACTC
GAAGCACCGC TGACGCACCT GCTGCGCAAC GCGGTCGATC ACGGCATCGA AACCCCACAG
GAACGCCTGC TCAAGGGCAA GCCCGAGGAA GGCCTGATCC GTCTGCGCGC CTCGCATCAG
GCCGGTCTGC TGGTGCTGGA ACTGAGCGAC GACGGCAATG GTGTGGATCT GGAAAAAGTC
CGCCGCAGCA TCGTCGAACG CCAGTTGTCG CCCGCGGAAA CCGCCGCCCA GTTGAGTGAA
GAGGAACTGC TGACCTTCCT GTTTCTGCCG GGTTTCAGTC TGCGCGACAA GGTCACCGAA
GTGTCGGGTC GTGGCGTCGG TCTCGATGCT GTTCAGCACA TGGTCCGCCA GTTGCGCGGT
GCGGTGGTGC TGGAGCAGAC GGCGGGCGAG GGCAGTCGTT TCTATCTCGA AGTGCCGCTG
ACCCTGTCGG TGGTGCGCAG CCTGGTGGTG GAGGTCGGCG ACGAGGCCTA TGCCTTCCCG
CTGGCGCACA TCGAGCGCAT GTGCGACCTG GCGCCGGAGG ACATCGTGCA GGTCGAAGGG
CGCCAGCATT TCTGGCACGA AGGCCGGCAC GTCGGGCTGG TGGCGGCCAG TCAGTTGTTG
CAACGCCCGG CCAGCCAGAA CAGCGGCGAG ACCCTGAAGG TCGTGGTGAT CCGCGAGCGT
GATGCGATCT ACGGCGTGGC GGTCGAGCGC TTCATCGGCG AGCGCACGCT GGTGGTGCTG
CCACTGGACG AACGGCTGGG CAAGGTGCAG GACATTTCCG CCGGGGCCTT GCTCGACGAT
GGCTCGGTGG TGCTGATCGT CGATGTTGAA GACATGCTGC GTTCGGTGGA CAAACTGCTC
AATACCGGGC GTCTGGAGCG CATTGCCCGC CACGGTAATC AGGCCGCGGA AGCCGCGCGC
AAACGGATTC TGGTGGTCGA CGACTCGCTG ACCGTGCGCG AGCTGCAACG CAAGCTGCTG
CTCAATCGCG GCTACGACGT GGCCGTTGCG GTGGACGGCA TGGACGGCTG GAACGCCCTG
CGCTCCGAGG ACTTCGATCT GCTGATCACC GACATTGACA TGCCGCGCAT GGACGGCATC
GAACTGGTCT CGCTGCTGCG CCGCGACAAC CGTCTGCAAT CGTTGCCGGT GATGGTGGTG
TCCTACAAGG ATCGCGAGGA AGATCGCCGC CGTGGACTGG ACGCCGGCGC CGACTATTAT
CTGGCCAAGG CCAGTTTTCA TGACGACGCC CTGCTCGACG CGGTGGTTGA GCTCATCGGA
GGAGCGCGGG CATGA
|
|---|
| Protein sequence | MTPEQMRDAS LLELFSLEAE AQTQVLSAGL LALERNPTQA DQLESCMRAA HSLKGAARIV
GIDSGVSVAH VMEDCLVSAQ EGRLFLRPEH IDALLQGTDL LMRIATPANG PQPADIEAYV
ALMGGLLDPA APAVVPAAQS APPMAEFQLQ PLPVVEPAPV EVSVEVTEPE PAPRKSKRTT
EGGERVLRVT AERLNSLLDL SSKSLVETQR LKPHLATMQR LKRMQNNGLR ALESLNVHLK
EHALSLEAQE ALEDARRLLA ESQQLLAEKN AELDEFAWQA SQRAQVLYDT ALACRMRPFA
DVLSGQVRMV RDLGRSLGKQ VRLEIEGEKT QVDRDVLEKL EAPLTHLLRN AVDHGIETPQ
ERLLKGKPEE GLIRLRASHQ AGLLVLELSD DGNGVDLEKV RRSIVERQLS PAETAAQLSE
EELLTFLFLP GFSLRDKVTE VSGRGVGLDA VQHMVRQLRG AVVLEQTAGE GSRFYLEVPL
TLSVVRSLVV EVGDEAYAFP LAHIERMCDL APEDIVQVEG RQHFWHEGRH VGLVAASQLL
QRPASQNSGE TLKVVVIRER DAIYGVAVER FIGERTLVVL PLDERLGKVQ DISAGALLDD
GSVVLIVDVE DMLRSVDKLL NTGRLERIAR HGNQAAEAAR KRILVVDDSL TVRELQRKLL
LNRGYDVAVA VDGMDGWNAL RSEDFDLLIT DIDMPRMDGI ELVSLLRRDN RLQSLPVMVV
SYKDREEDRR RGLDAGADYY LAKASFHDDA LLDAVVELIG GARA
|
|---|
| |