Gene Pfl01_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1035 
Symbol 
ID3716165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1199011 
End bp1200720 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content63% 
IMG OID 
Productexonuclease RecJ 
Protein accessionYP_346767 
Protein GI77457262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.626016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG ATCCTCGCCC GTTGCCCGCC ACTCTGCCGT TTCTCGGTGA ACTGCCACCC 
CTGCTGACCC GCCTGTATGC GGCGCGGGGC GTGCAGTCCG AGGCGGAGCT GGACAAGAGC
CTGGCGCGGC TGATTCCGTT CCAGCAGCTC AAAGGGATCG ATGCGGCGGT TGACCTGCTG
GTGACAGCGC TGGAGCAGCG GCAGCGGATC CTGATCGTCG GCGATTTCGA CGCCGACGGC
GCGACGGCCA GCACCGTGGG CGTGCTCGGT TTGCGCCTGC TGGGCGCGGC GCACGTCGAT
TATCTGGTGC CAAACCGCTT CGAATACGGC TACGGCCTGA CCCCGGAAAT CGTCGAAGTC
GCGATGACCC GCGAGCCGCA GTTGCTGATC ACCGTCGACA ACGGTATTTC CAGCGTTGAA
GGTGTCGCGG CCGCGAAGCG CCATGGCCTG AAGGTCTTGA TTACTGACCA CCACTTGCCC
GGCGATGAAC TGCCGCAGGC CGATGCACTG GTCAATCCGA ACCAGCCCGG CTGCGAGTTC
CCGAGCAAGG CGCTGGCCGG GGTCGGGGTG ATTTTCTATG TGTTGATGGC TTTGCGTGCA
CGTCTGCGCA GCCTTGGCTG GTACGAGAAC AAGCCGCAGC CAAACATCGG CGAACTGCTG
GATCTGGTGG CGCTGGGCAG CGTTGCCGAC GTGGTGCCGT TGGATGCCAA CAACCGGATT
CTGGTGCACC AGGGTCTGGA GCGAATTCGC GCCGGACGTG CGCGGCCGGG GATCAAGGCG
ATCCTGGAAG TGGCCAAGCG TGAGGCTTCG CGCATTACGT CTACCGACCT CGGATTTATC
GTCGGCCCGC GCCTGAACGC GGCGGGACGT CTGGATGACA TGAGCCTGGG CATCGAATGC
CTGCTGACCC ACGACGCTGC GCTGGCCCGG GAAATGGCGG CGCAACTGGA CGGCATGAAT
CAGGACCGCA AATCCATCGA GCAAGGCATG CAGCGTGAAG CGCTGGCCCA GCTCAAGGAC
TTGCCGGTCG AGTCGATGCC GTTCGGTTTG TGCCTGTTCG ATCCGGAATG GCACCAGGGC
GTCATCGGTA TTCTGGCTTC GCGGATGAAG GAGCGGTATT TCCGCCCGAC CATCGCCTTC
GCCGATGCCG GCGACGGCCT GCTCAAGGGC TCGGGCCGTT CGGTGCAGGG TTTCCATATT
CGTGATGCGC TGAGCGTGGT CGCGGCACAA CATCCGGATC TGATCAGCAA GTACGGTGGC
CATGCGATGG CGGCCGGTCT GACCTTGCCG CAGGAGAATT TTTCGTTGTT TGCCGAGGCC
TTCGACGCCG AGGTGCGTAG GCAACTTCGC GAAGAGGACC TGACCGGGCG CCTGCTGTCG
GACGGCACGC TGGCGGTCGA GGAGTTTCAT CTGGAGCTGG CTCGTGCCCT GCGCCACGCC
GGGCCATGGG GCCAGCATTT TCCAGAACCG CTGTTTCACG GGGTGTTCCA GTTGGTCGAG
CAGCGGGTTG TGGGTGAGCG GCACCTGAAA GTGGTGCTGA AAACCGAATG CGGTTCGGTG
AAGCTTGATG GCATCGCGTT CGGGATTGAT CGCGATATCT GGCCGAACCC GACGATCAAA
TGGGTCGAAC TGGCTTACAA GCTCGACCTC AACGAGTTTC GCGGCAATGA GACCGTGCAG
TTGATGATTG CTCATATCGA GCCGCGCTAA
 
Protein sequence
MRIDPRPLPA TLPFLGELPP LLTRLYAARG VQSEAELDKS LARLIPFQQL KGIDAAVDLL 
VTALEQRQRI LIVGDFDADG ATASTVGVLG LRLLGAAHVD YLVPNRFEYG YGLTPEIVEV
AMTREPQLLI TVDNGISSVE GVAAAKRHGL KVLITDHHLP GDELPQADAL VNPNQPGCEF
PSKALAGVGV IFYVLMALRA RLRSLGWYEN KPQPNIGELL DLVALGSVAD VVPLDANNRI
LVHQGLERIR AGRARPGIKA ILEVAKREAS RITSTDLGFI VGPRLNAAGR LDDMSLGIEC
LLTHDAALAR EMAAQLDGMN QDRKSIEQGM QREALAQLKD LPVESMPFGL CLFDPEWHQG
VIGILASRMK ERYFRPTIAF ADAGDGLLKG SGRSVQGFHI RDALSVVAAQ HPDLISKYGG
HAMAAGLTLP QENFSLFAEA FDAEVRRQLR EEDLTGRLLS DGTLAVEEFH LELARALRHA
GPWGQHFPEP LFHGVFQLVE QRVVGERHLK VVLKTECGSV KLDGIAFGID RDIWPNPTIK
WVELAYKLDL NEFRGNETVQ LMIAHIEPR