Gene Pfl01_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1033 
Symbol 
ID3716163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1197068 
End bp1198267 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content60% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_346765 
Protein GI77457260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.914753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCG CCAACAAACC GCTCAGCGGT CTGAAAGTCA TTGAATTGGG TACTTTGATT 
GCCGGGCCGT TTGCCTCGCG CATCTGCGGC GAATTCGGCG CCGAAGTGAT CAAGATCGAG
TCGCCGGACG GCGGTGATCC GTTGCGCAAG TGGCGCAAGT TGTACGAAGG CACGTCGCTG
TGGTGGTTCG TCCAGGCACG CAACAAAAAG TCCCTGACGC TGAACCTGAA ACACCCCGAC
GGCCTGGCGA TCCTGAAAAA ACTGCTGGGT GAAGCCGATA TCCTGATCGA AAACTTCCGC
CCCGGCGTGC TGGAAAAACT CGGTCTGAGC TGGGAAACCC TTCACGCACT CAATCCCAAA
CTGGTGATGG TGCGCCTGTC CGGTTTCGGC CAGACCGGGC CGATGAAGGA CCAGCCAGGT
TTCGGCGCGG TCGGCGAATC CATGGGCGGC CTGCGCTACA TCACCGGTTT CGAAGACCGG
CCGCCGGTGC GCACCGGGAT TTCCATTGGC GATTCGATTG CGGCTTTGTG GGGCGTGATC
GGCGCGTTGA TGGCTTTGCG TCATCGCGAG GTCAACGGCG GTCTCGGTCA GGTGGTCGAT
GTGGCGTTGT ACGAAGCCAT CTTCGCCATG ATGGAAAGCA TGGTCCCGGA GTTCGATGTG
TTCGGATTCA TTCGCGAGCG TACCGGCAAC ATCATGCCGG GCATCACACC CTCCTCGATC
CACACCAGCG CCGACGGCAA ACACGTGCAG ATCGGCGCCA ACGGTGATGC GATTTTCAAG
CGTTTCATGC TGATCATCGG CCGTGAAGAT CTGGCCAATG ACGCGGCGCT GGCCAGCAAT
GACGGGCGCG ACACTCGCCG CGACGAGCTA TACGGCGTGA TCGACCGTTG GGTCAATTCG
CTGCCGCTGC AAACCGTGCT GGACCTGCTG AACCAGGCGG AGGTGCCCGC CAGCCGGATC
TTCAGCGCCG AAGACATGTT CAACGATCCG CAGTACCTGG CCCGGGAAAT GTTCCTGCAG
GCCAAACTGC CGGACGGCAA ACCCTTCAAG ATGCCAGGCA TCGTGCCGAA ACTCTCTGAG
ACACCCGGCT CGTCCGAATG GGTCGGACCG CAGCTCGGTG AACACAATGC GCAGGTACTC
CACGATCTTG GCTACGACGA GAAGCAGATC GCCCGGCTGC GCGAAGACGG AGCCATCTGA
 
Protein sequence
MPFANKPLSG LKVIELGTLI AGPFASRICG EFGAEVIKIE SPDGGDPLRK WRKLYEGTSL 
WWFVQARNKK SLTLNLKHPD GLAILKKLLG EADILIENFR PGVLEKLGLS WETLHALNPK
LVMVRLSGFG QTGPMKDQPG FGAVGESMGG LRYITGFEDR PPVRTGISIG DSIAALWGVI
GALMALRHRE VNGGLGQVVD VALYEAIFAM MESMVPEFDV FGFIRERTGN IMPGITPSSI
HTSADGKHVQ IGANGDAIFK RFMLIIGRED LANDAALASN DGRDTRRDEL YGVIDRWVNS
LPLQTVLDLL NQAEVPASRI FSAEDMFNDP QYLAREMFLQ AKLPDGKPFK MPGIVPKLSE
TPGSSEWVGP QLGEHNAQVL HDLGYDEKQI ARLREDGAI