Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1033 |
Symbol | |
ID | 3716163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1197068 |
End bp | 1198267 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_346765 |
Protein GI | 77457260 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.914753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCG CCAACAAACC GCTCAGCGGT CTGAAAGTCA TTGAATTGGG TACTTTGATT GCCGGGCCGT TTGCCTCGCG CATCTGCGGC GAATTCGGCG CCGAAGTGAT CAAGATCGAG TCGCCGGACG GCGGTGATCC GTTGCGCAAG TGGCGCAAGT TGTACGAAGG CACGTCGCTG TGGTGGTTCG TCCAGGCACG CAACAAAAAG TCCCTGACGC TGAACCTGAA ACACCCCGAC GGCCTGGCGA TCCTGAAAAA ACTGCTGGGT GAAGCCGATA TCCTGATCGA AAACTTCCGC CCCGGCGTGC TGGAAAAACT CGGTCTGAGC TGGGAAACCC TTCACGCACT CAATCCCAAA CTGGTGATGG TGCGCCTGTC CGGTTTCGGC CAGACCGGGC CGATGAAGGA CCAGCCAGGT TTCGGCGCGG TCGGCGAATC CATGGGCGGC CTGCGCTACA TCACCGGTTT CGAAGACCGG CCGCCGGTGC GCACCGGGAT TTCCATTGGC GATTCGATTG CGGCTTTGTG GGGCGTGATC GGCGCGTTGA TGGCTTTGCG TCATCGCGAG GTCAACGGCG GTCTCGGTCA GGTGGTCGAT GTGGCGTTGT ACGAAGCCAT CTTCGCCATG ATGGAAAGCA TGGTCCCGGA GTTCGATGTG TTCGGATTCA TTCGCGAGCG TACCGGCAAC ATCATGCCGG GCATCACACC CTCCTCGATC CACACCAGCG CCGACGGCAA ACACGTGCAG ATCGGCGCCA ACGGTGATGC GATTTTCAAG CGTTTCATGC TGATCATCGG CCGTGAAGAT CTGGCCAATG ACGCGGCGCT GGCCAGCAAT GACGGGCGCG ACACTCGCCG CGACGAGCTA TACGGCGTGA TCGACCGTTG GGTCAATTCG CTGCCGCTGC AAACCGTGCT GGACCTGCTG AACCAGGCGG AGGTGCCCGC CAGCCGGATC TTCAGCGCCG AAGACATGTT CAACGATCCG CAGTACCTGG CCCGGGAAAT GTTCCTGCAG GCCAAACTGC CGGACGGCAA ACCCTTCAAG ATGCCAGGCA TCGTGCCGAA ACTCTCTGAG ACACCCGGCT CGTCCGAATG GGTCGGACCG CAGCTCGGTG AACACAATGC GCAGGTACTC CACGATCTTG GCTACGACGA GAAGCAGATC GCCCGGCTGC GCGAAGACGG AGCCATCTGA
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Protein sequence | MPFANKPLSG LKVIELGTLI AGPFASRICG EFGAEVIKIE SPDGGDPLRK WRKLYEGTSL WWFVQARNKK SLTLNLKHPD GLAILKKLLG EADILIENFR PGVLEKLGLS WETLHALNPK LVMVRLSGFG QTGPMKDQPG FGAVGESMGG LRYITGFEDR PPVRTGISIG DSIAALWGVI GALMALRHRE VNGGLGQVVD VALYEAIFAM MESMVPEFDV FGFIRERTGN IMPGITPSSI HTSADGKHVQ IGANGDAIFK RFMLIIGRED LANDAALASN DGRDTRRDEL YGVIDRWVNS LPLQTVLDLL NQAEVPASRI FSAEDMFNDP QYLAREMFLQ AKLPDGKPFK MPGIVPKLSE TPGSSEWVGP QLGEHNAQVL HDLGYDEKQI ARLREDGAI
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