| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1009 |
|---|
| Symbol | |
|---|
| ID | 3716011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1175049 |
|---|
| End bp | 1175600 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_346741 |
|---|
| Protein GI | 77457236 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.454999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.558933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT GCAGCCACTG CGGCAACCCG GTGACCCAGC GCATTCCCGA AGGCGACTCG
CGGCTGCGAT TCGTCTGCGA CAGCTGTCAG ACGATTCACT ACCAGAACCC CAATATCGTG
GCCGGTTGCG TACCGACCTG GGGCAGCAAA GTCCTGCTGT GTCGCCGCGC CATCGAGCCA
CGCCTCGGTT ACTGGACGCT GCCCGCCGGG TTCATGGAGA ACGGCGAGAC CATCGAACAG
GCCGCCATCC GCGAAACCGC CGAGGAAGCC TGCGCCCGGG TGCGCAACCT GAGCATCTAT
ACCTTGATCG ACGTGCCGCA CATCAGTCAG GTGCATGTGT TTTTCCGCGC CGAGCTGGCG
GATCTGGACT TCGCCGCCGG CCCCGAAAGC CTGGAAGTGC AACTGTTCGA CGAGGAAGAC
ATTCCCTGGG ACGAACTGGC TTTCCGCACG GTGGGCCGTA CCCTGGAATG CTTCTTCGCT
GACCGGCGTG TCGAGGTTTA TCCGGTTCGC TCCGAATCGA TCCCGCCACT CGCTCAACCG
GCCATCACTT GA
|
|---|
| Protein sequence | MKFCSHCGNP VTQRIPEGDS RLRFVCDSCQ TIHYQNPNIV AGCVPTWGSK VLLCRRAIEP
RLGYWTLPAG FMENGETIEQ AAIRETAEEA CARVRNLSIY TLIDVPHISQ VHVFFRAELA
DLDFAAGPES LEVQLFDEED IPWDELAFRT VGRTLECFFA DRRVEVYPVR SESIPPLAQP
AIT
|
|---|
| |