| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0996 |
|---|
| Symbol | recO |
|---|
| ID | 3715998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1158040 |
|---|
| End bp | 1158729 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_346728 |
|---|
| Protein GI | 77457223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0594947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA GCCCGCCTCC CGCCCAACCC GCCTACGTCC TCCACTCCCG CGCCTACCGC
GAAACCAGCG CATTGGTGGA CTTCCTCACG CCGCAAGGTC GGCTGCGGGC GGTGTTGCGC
AGTGCGCGGG GCAAGGCCGG GACGTTGGCG CGGCCATTCG TGCCGCTGGA AGTGGAGTTT
CGCGGCAAGG GTGAGTTGAA GAATGTCGGG CGCATGGAAA GCGTCGGCAA CGCGACCTGG
ATGGTCGGCG AGGCGCTGTT CAGTGGCCTG TATCTCAATG AACTGTTGAT TCGCCTGCTA
CCCGCCGAAG ACCCGCACCC GGCGGTGTTC GATCATTACG CCGCGACCTT GCTGGCATTG
GCCGAAGGCC GGCCGCTGGA ACCGCTGCTG CGTTCCTTCG AGTGGCGGCT GCTTGATGAC
CTCGGTTACG GTTTTTCCCT GAACACCGAC ATCAACGACG AGCCCGTTGC TGTTGATGGT
CTCTACCGTT TGCAGGTGGA TGCCGGACTC GAGCGTGTCT ACCTGCTGCA ACCCGGTCTG
TTCAACGGCA CCGAACTGCT GGCCATGGCC GAAGCCGACT GGTCGGCACC GGGCGCACTG
TCCGCCGCCA AGCGCCTGAT GCGTCAAGCC TTGGCGGTGC ATCTGGGCGG TCGTCCCCTC
GTCAGTCGAG AGCTGTTTCG CAAGCCCTGA
|
|---|
| Protein sequence | MSQSPPPAQP AYVLHSRAYR ETSALVDFLT PQGRLRAVLR SARGKAGTLA RPFVPLEVEF
RGKGELKNVG RMESVGNATW MVGEALFSGL YLNELLIRLL PAEDPHPAVF DHYAATLLAL
AEGRPLEPLL RSFEWRLLDD LGYGFSLNTD INDEPVAVDG LYRLQVDAGL ERVYLLQPGL
FNGTELLAMA EADWSAPGAL SAAKRLMRQA LAVHLGGRPL VSRELFRKP
|
|---|
| |