Gene Pfl01_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0973 
Symbol 
ID3715956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1133444 
End bp1134475 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content59% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_346705 
Protein GI77457200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.846042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGT TGAAATCCAC GCTGGCGATC GTGACTGCTG CTGCAGTACT GGGTGTCAGC 
GGGTTCGCTC AGGCGGGTGC AACCCTGGAT GCAGTGAAGA AGAAAGGATT CGTGCAGTGC
GGCGTCAGCG ATGGCTTGCC AGGCTTCTCG GTTCCGGATT CCACCGGCAA GATCGTGGGT
ATCGATGCTG ACGTCTGCCG CGCCGTGGCC GCTGCCGTGT TCGGCGACGC GACCAAGGTC
AAGTTCAGTC AGCTGAACGC CAAGGAGCGT TTCACCGCGC TGCAGTCGGG CGAGATCGAC
ATTCTGTCGC GCAACACCAC CATGACCAGC TCCCGTGACG CGGGCATGGG CCTGAAATTC
CCGGGCTTCA TTACCTACTA CGACGGCATT GGCTTCCTGG TAAACAACAA GCTGGGCGTG
AAGAGTGCCA AAGAGCTGGA CGGTGCAACC ATCTGCATCC AGGCCGGTAC CACCACCGAG
CTGAACGTTT CCGACTACTT CCGCGGCAAC GGTCTGAAAT ACACCCCGAT CACTTTCGAC
ACCTCCGATG AAAGCGCCAA GTCGCTGGAA TCCGGTCGTT GCGACGTGCT GACCTCCGAC
AAGTCCCAGC TGTTCGCCCA GCGCAGCAAG CTGGCTTCGC CGAAGGACTA CGTGGTTCTG
CCGGAAACCA TTTCCAAGGA ACCCCTGGGC CCGGTCGTGC GTAACGGCGA CGACGAGTGG
CTGGCCATCG TGCGTTGGGT TGGCTACGCG CTGCTGAACA CCGAAGAAGC CGGCATCTCT
TCGAAGAACG TCGAAGCTGA AGCCAAATCC ACCAAGAACC CGGATGTCGC TCGTATGCTC
GGCGCAGACG GCGAATACGG CAAAGACCTG AAACTGCCGA AGGACTGGGT CGTACAGATC
GTCAAGCAAG TCGGCAACTA CGGCGAAATC TTCGAGAAAA ACCTCGGCAA GAGCACTCCG
CTGGAAATCG ACCGCGGCCT GAACGCGCTG TGGAACAACG GCGGCATTCA ATACGCACCA
CCAGTGCGCT GA
 
Protein sequence
MKMLKSTLAI VTAAAVLGVS GFAQAGATLD AVKKKGFVQC GVSDGLPGFS VPDSTGKIVG 
IDADVCRAVA AAVFGDATKV KFSQLNAKER FTALQSGEID ILSRNTTMTS SRDAGMGLKF
PGFITYYDGI GFLVNNKLGV KSAKELDGAT ICIQAGTTTE LNVSDYFRGN GLKYTPITFD
TSDESAKSLE SGRCDVLTSD KSQLFAQRSK LASPKDYVVL PETISKEPLG PVVRNGDDEW
LAIVRWVGYA LLNTEEAGIS SKNVEAEAKS TKNPDVARML GADGEYGKDL KLPKDWVVQI
VKQVGNYGEI FEKNLGKSTP LEIDRGLNAL WNNGGIQYAP PVR