Gene Pfl01_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0971 
Symbol 
ID3715934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1130745 
End bp1132223 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content63% 
IMG OID 
ProductATP-dependent RNA helicase RhlB 
Protein accessionYP_346703 
Protein GI255961279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.951762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC TCAAAGCACT CAAGAAAATG TTCGGTAAAA GCGAGGCTGA GCAGCTCGCG 
CCAGTCCCCA CTGCGCCGTC GCACGCCGCC GGTCATCGCA ACGATGCCAG CAAGGCCGAC
CGCCAGACGC CCGCCACGCC CCCAAAGCAA GAACCGAAAC CCGCTCCAGC TGCCGCGCCC
GCCACCGAGC CGGCCCGCAG CGAAACACCG AAACCGGCCA GACCACGTCG CGAACCCAAG
CCCAAGGCGC CGGTGATTCC CTGGAAACTC GAAGACTTCG TCGTCGAGCC CCAGGAAGGC
AAGACCCGCT TCCACGATTT CAAACTCGCC CCGGAACTGA TGCACGCCAT CCACGACCTG
GGTTTCCCGT ATTGCACACC GATCCAGGCC CAGGTGCTGG GTTATACCCT CGCCGGCAAA
GACGCCATCG GCCGCGCACA GACCGGCACC GGCAAGACCG CCGCGTTCCT GATCTCGATC
ATCACCCAGC TGCTGCAGAC CCCGCCGCCG AAAGAGCGCT ACATGGGCGA ACCACGGGCG
CTGATCATCG CGCCGACCCG CGAGCTGGTG GTGCAGATCG CCAAGGACGC CGCCGACCTG
ACCAAGTACA CCGGTCTCAA TGTCATGACC TTCGTCGGCG GGATGGACTT CGACAAGCAG
CTCAAGCACC TCGAAGCGCG CCATTGCGAC ATCCTCGTCG CGACCCCGGG CCGCCTGCTT
GACTTCAACC AGCGCGGTGA CGTGCACCTG GACATGGTCG AAGTGATGGT GCTGGACGAA
GCCGACCGCA TGCTCGACAT GGGCTTCATC CCGCAGGTCC GGCAGATCAT TCGCCAGACC
CCGCCGAAAA GCGAACGCCA GACTCTGCTG TTCTCCGCGA CCTTCACCGA TGACGTGATG
AACCTCGCCA AGCAGTGGAC CACCGATCCT GCGATCGTCG AAATCGAAGT CACCAACGTG
GCCAACGAAA ACGTCGAGCA GCACATCTAC GCGGTGGCCG GTGCCGACAA ATACAAACTG
CTGTTCAACC TGGTCAACGA CAACGGCTGG GAGCGGGTCA TCGTGTTCGC CAACCGCAAG
GACGAAGTGC GCCGCATCGA GGAACGCCTG GTGCGTGACG GCATCAACGC CGCGCAACTG
TCCGGCGACG TGCCGCAGCA CAAGCGGATC AAGACGCTGG AAGGCTTCCG CGAAGGCAAG
ATCCGGGTGC TGGTCGCCAC CGACGTGGCC GGTCGCGGTA TCCACATCGA CGGCATCAGC
CACGTGATCA ACTTCACTCT GCCGGAAGTC CCGGACGACT ACGTGCACCG CATCGGCCGT
ACCGGTCGCG CTGGCGCCGA CGGTGTGTCG ATCAGCTTCG CCGGTGAGGA CGACTCCTAT
CAGTTGCCGT CCATCGAAGA AAAACTCGGT CGCAAGATCA GCTGTGAAAC ACCGCCGACC
CATCTATTGC GGGCGGTTGA GCGCAAGCGT CCACAGTAA
 
Protein sequence
MTVLKALKKM FGKSEAEQLA PVPTAPSHAA GHRNDASKAD RQTPATPPKQ EPKPAPAAAP 
ATEPARSETP KPARPRREPK PKAPVIPWKL EDFVVEPQEG KTRFHDFKLA PELMHAIHDL
GFPYCTPIQA QVLGYTLAGK DAIGRAQTGT GKTAAFLISI ITQLLQTPPP KERYMGEPRA
LIIAPTRELV VQIAKDAADL TKYTGLNVMT FVGGMDFDKQ LKHLEARHCD ILVATPGRLL
DFNQRGDVHL DMVEVMVLDE ADRMLDMGFI PQVRQIIRQT PPKSERQTLL FSATFTDDVM
NLAKQWTTDP AIVEIEVTNV ANENVEQHIY AVAGADKYKL LFNLVNDNGW ERVIVFANRK
DEVRRIEERL VRDGINAAQL SGDVPQHKRI KTLEGFREGK IRVLVATDVA GRGIHIDGIS
HVINFTLPEV PDDYVHRIGR TGRAGADGVS ISFAGEDDSY QLPSIEEKLG RKISCETPPT
HLLRAVERKR PQ