| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0956 |
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| Symbol | |
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| ID | 3715919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1113955 |
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| End bp | 1115436 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | outer membrane protein AlgE |
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| Protein accession | YP_346688 |
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| Protein GI | 77457183 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.527814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA ATCCCTTTGT GAAGGCCGGC ATTGGCCTCA CGTTCGCGCT GATCTGGTCT
TGCCCGACCC TGGCCGCGAT GACGGAATCG AAAAACTTCG GCCTCGAAGT GAAAATCACC
GGTCAGTCCG AAGACGACCG CGACCTCGGC ACCGCCAGCG GCGGCGACGT CAACGGCCTC
GGCCTTGATC TGCGTCCGTG GGTCTACGGC GAAAGCGGCG CGTGGAGCGC CTACGCCATG
GGCCAGGCCG TGACCTCGAC CGACATCATC GAGACCGACA CCCTGAAGCA GTCCGACGGT
GAACAAACCA CCGACAACGG CGACCGCAAG ACCAAGAAAA ACTACCTGGC GATGCGCGAG
TTCTGGGTCG GCTACAGCGG CCTGACGCCC TACCCCGGCG AGATCCTCAA GTTCGGTCGC
CAGCGCCTGC GCAACGACGA CGGCCAGTGG CGCGACACCA ACATCGAAGC CTTGAACTGG
ACTTTCGACA CCACCCTGCT GCGGGCCAAC GCCGGTGTCG CCGAACGCTT CAGCGAATAC
CGCACCGACT TGAAAGAGCT GGCGCCGAAA GACAAGGATC GCCTGCACGC CTACGCCGAT
GCCGCTTACC AGTGGACACC GGGCAACTGG GTCGGGATTC GCGGCCACCA CACCCATGAC
GACGGCAAGC TCGACTATCC GGAGCCGGGC GTGGCCGGCG ACTCGCTGGA CAAGAAAGAA
AACGGCGACA TCAGCTGGCT CGGCCTGACC GCTGACAGCG ACGCCTACAA CTGGCGCAAC
ACCAACACCG TCAACTACTG GGGCAGCATC ACCGGCATGA GCGGCGACCG CGACACGGTC
AACGCCCTCA ACGCCGATGG CACCCGCCCG GCGCAAGCCA AGCGCAGTGA CAACGTCGAC
GGCTGGGCCA CCGACATCGG TGTGCGTCTG CGCCTCGATC CGCAGTGGCA GATCGGTGCG
GCGTATGCCC GTGCCAGCGC CGATTACGAA CAGAACGGCC TGGAAAGCAA CCGCTCGAAC
TACACCGGTA CTCGCTCCCG CGTTCACCGT TTCGGCGAGG CCTTCCGTGG CGAAATGAAC
AACATGCAGA CCGCCACCCT GTTCGGTTCC TGGATGCTCA ACGACCAGTA CGACGCCAGC
CTGATCTACC ACAAGTTCTG GCGCGTGGAC GGCAACAAGC CGGTTGGCAG CAACGGCATC
AACGCCGTGG AAAACAACAC CGACGACGTC ACCGGCGCAA TCCTTTCCAG CACCTCGCTG
CCATTGCAGG ACGGTAACAA GGATCTGGGC CAGGAAATGG ATCTGGTGGT CACCAAGTAC
TTCAAGCAAG GCTTGCTGCC GGCGGCGCTG AGCCAGTCGA TCGACGAGCC GTCGGCGCTG
GTACGTTTCC GTGGCGGTGT GTTCAAGCCG GGTGATGCCT ACGGCAGCCA GGTTGATTCG
TACATGCACC GCGCGTTCAT CGACGTGATC TGGCGCTTCT GA
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| Protein sequence | MKLNPFVKAG IGLTFALIWS CPTLAAMTES KNFGLEVKIT GQSEDDRDLG TASGGDVNGL
GLDLRPWVYG ESGAWSAYAM GQAVTSTDII ETDTLKQSDG EQTTDNGDRK TKKNYLAMRE
FWVGYSGLTP YPGEILKFGR QRLRNDDGQW RDTNIEALNW TFDTTLLRAN AGVAERFSEY
RTDLKELAPK DKDRLHAYAD AAYQWTPGNW VGIRGHHTHD DGKLDYPEPG VAGDSLDKKE
NGDISWLGLT ADSDAYNWRN TNTVNYWGSI TGMSGDRDTV NALNADGTRP AQAKRSDNVD
GWATDIGVRL RLDPQWQIGA AYARASADYE QNGLESNRSN YTGTRSRVHR FGEAFRGEMN
NMQTATLFGS WMLNDQYDAS LIYHKFWRVD GNKPVGSNGI NAVENNTDDV TGAILSSTSL
PLQDGNKDLG QEMDLVVTKY FKQGLLPAAL SQSIDEPSAL VRFRGGVFKP GDAYGSQVDS
YMHRAFIDVI WRF
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