| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0932 |
|---|
| Symbol | |
|---|
| ID | 3715835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1083488 |
|---|
| End bp | 1084363 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_346664 |
|---|
| Protein GI | 77457159 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA TCGATACCCT GCAAGTCTTT CAAGCCCTCA ACAATTCGCT CAATGCACGC
CTGGTGCACA GCGCCGAGTT GGGTGACGGC CTGTCTGCAG CTTTGTGGAC CAATCACCAC
GACGCCCAGG AATACGAAGC GCCGAGCCAT CACACCCTCT CCTGCTACAT CGCCGGCGGC
ACCGGCACCT TCCGTCGTGG CGAACCCGGC CACAAGGGCG GCCCGGACAA GCTGTGCATC
CTGCCGGCCG ACCACGAATC GGGTTGGGTC ATTAACGGCG ACATTCGTCT GGCTCACCTG
TATTTCAGCG CCGAACAATT TGCCCTGGGG TGCGTCACGC TGCTGGATCG CGAGCCCCGG
GAAATGCAGC TTCGCGAACA GACGTTTCTG GAAGATCCAC AACAGGCCCA ACGGTTTCGC
CAGTTACTGA CCTTGAACTG GGACGAACCC GGCGAACGTC TGCTGACCAG CAGCCTGGCC
CACGAACTGA TCAGCCATAC CCTGTTGAGT CAGGTCGGGG TACGTCAGGG CTTGCGTCTC
AAGGGTGGAC TGGCGCCGCA TCAACGTCGG CAACTGGTGG AATTCATCGA CAGCCAACTG
GCCGAGCCGA TCAGCCTCGG GCAACTGGCC GGGTTGTGTG CGTTGTCGGA ATACCACTTT
GCGCGGATGT TCCGGGTGAG CTTCGGTCTA CCGCCGCATC AGTATGTGTT GGCACGGCGT
TTGAGCCGGG CCCGGGAGTT GTTGCGCGGG ACAGCGTTGC CGTTGGGCGA GATTGCCCTG
GCGTGCGGAT TTGCCAGTGC CAGCCATTTC ACCAACCGCT TTCGCCAGGT GCTGGGTGGA
ACGCCCGGCG AGTATCGCCA GGCGTTTTTG CGCTGA
|
|---|
| Protein sequence | MAAIDTLQVF QALNNSLNAR LVHSAELGDG LSAALWTNHH DAQEYEAPSH HTLSCYIAGG
TGTFRRGEPG HKGGPDKLCI LPADHESGWV INGDIRLAHL YFSAEQFALG CVTLLDREPR
EMQLREQTFL EDPQQAQRFR QLLTLNWDEP GERLLTSSLA HELISHTLLS QVGVRQGLRL
KGGLAPHQRR QLVEFIDSQL AEPISLGQLA GLCALSEYHF ARMFRVSFGL PPHQYVLARR
LSRARELLRG TALPLGEIAL ACGFASASHF TNRFRQVLGG TPGEYRQAFL R
|
|---|
| |