Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0913 |
Symbol | |
ID | 3715816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1063616 |
End bp | 1065013 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_346645 |
Protein GI | 77457140 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAACC AGATTGCCAG CTTTCGGGCG GCACTCGACG CCCGTCCTGT GTCCCGCTTT CAGTGGTTGC TCCTGATTCT TCTCGCCTTG CTGCTGGTCA CCGACGGCTA TGACGCCCAG GTGCTCGGTT ACGTGGTGCC GGCACTGGCG CAGGACTGGG GCCTGGAAAA ATCCGCATTC GGTCCGGTAT TCAGCGCCAA CCTTCTGGGC CTGACCCTCG GTTCGCTCGC CGTGACGCCG CTGGCCGATC GCTTCGGCGT TCGACGGATT CTGCTCGCCT GCGTGCTGAT CTACGCCAGC CTCACCGTGC TGATGGTGTT CGCCGATTCC CTGAATACCC TGATGATCGC GCGTTTCATC TGCGGCATCG GCATGGGCGG CGCGATGCCC AGCGCCATGG CGTTGATGTC GGAATATTCA CCGCCACGCC TGCGTACGCT GATGGTGACG CTGGCGGCCT GCGGTTTTTC TTTCGGCGGT GCGGCGGGTG GTTTTGTCGC GGCCGGTTTC ATTGACCGTT TCGGTTGGCA AGCGGTGTTC CTCGCCGGCG GTGTCACGCC GTTGCTGTTG TTCCCGTTTC TCTGGTGGAT GCTGCCGGAA TCCTTGCCAC GACTGCTGCG TGACGCACCA CCCTATGCGC GCCTGCGCAA AGTCACCGCG CGAATGCTGC CAGACTGGCA ACCGCCCGCC GCATCGGTTG AGCAGAATGA GCGCGAGCAG GGCAGCAAAC TGACCGTGGT GGAGTTGTTC CGCAATGGTT ACGCCCGTCC GACCTTGCTG ATCTGGGCGA CGTTTTTCGT CAGCCTGATC CTGCTGTATT TCATGATCAG CTGGCTGCCG TCGCTGCTGC TCGAAAGCGG GCTGAAACTC AATGAAGCGA ACCTGGTGAC GTCGATGTTC CTGTTCGCCG GCACGCTCGG CGCGATCTGC ATGGCGTGGT TCGCCGACCG CTTGAAAAGC AAGGTGCGAC TGCTGTCCGG CGTGTTGGCC GGCGCGGCGG TGTGCACGAT CCTGCTGGGC CTGAACCACG ACAATCCGCG TTATCTGGTG GCCTGTGTGT TTACGGCGGG GTTTTGCATC ATTGGCGGGC AACTGACGCT CAATGCGTTC GCCAGCAATT TCTATCCGGC CCACGTGCGC GCTACCGGCA CCGGCTGGGC ATTGGGAGTA GGGCGGTTCG GCTCGATTCT CGGGCCGCTG TTCGGCAGCC TGTTGCTGGC AACGCACATT CCGGTGGAGC AGATTTTCTT CTTCTGCGCG ATTCCGGCGG TGATTGCGGC GTTGCTGATC ATTCAGGTGC GTTCGCCAGC CACTGCGCTG TTCAGTGGAC AACCGCGTTC GGTGGCAGAT GGCCCAGCCG TTCCGTCAGG CGAAGTCGCT GAATCGGGTC GTCGCTGA
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Protein sequence | MHNQIASFRA ALDARPVSRF QWLLLILLAL LLVTDGYDAQ VLGYVVPALA QDWGLEKSAF GPVFSANLLG LTLGSLAVTP LADRFGVRRI LLACVLIYAS LTVLMVFADS LNTLMIARFI CGIGMGGAMP SAMALMSEYS PPRLRTLMVT LAACGFSFGG AAGGFVAAGF IDRFGWQAVF LAGGVTPLLL FPFLWWMLPE SLPRLLRDAP PYARLRKVTA RMLPDWQPPA ASVEQNEREQ GSKLTVVELF RNGYARPTLL IWATFFVSLI LLYFMISWLP SLLLESGLKL NEANLVTSMF LFAGTLGAIC MAWFADRLKS KVRLLSGVLA GAAVCTILLG LNHDNPRYLV ACVFTAGFCI IGGQLTLNAF ASNFYPAHVR ATGTGWALGV GRFGSILGPL FGSLLLATHI PVEQIFFFCA IPAVIAALLI IQVRSPATAL FSGQPRSVAD GPAVPSGEVA ESGRR
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