Gene Pfl01_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0898 
Symbol 
ID3715801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1041741 
End bp1042628 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_346630 
Protein GI77457125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCA AACAACTCAG AAGTTTCGTC GAAGTCATGC ATCAGGGCGG TTTCACTCAA 
GCTGCGAAGA CCCTGCACAT CAGTCAGTCC GCCGTGAGCA AGCAGATCGC CCAGCTCGAA
CAGAGTCTCG GCACCCCGCT TCTCGAACGG CTCGGCTCGC AGATACGCCT GACCGCCGCC
GGCAGTGTGG TGTTGCATCG GGCCGAAGGC ATGCTGCGCT TGCGCAATGA ATTGCTCAGC
GAACTGGATG ACCTCAGCCA ACTGGCACGG GGCGAGTTAC GTCTCGGGCT GCCCTTGCTG
GGCAGCGATG CATTGTTTGC CGGGCTGTTT GCCGAATACC GACGGCGCTA TCCGAACATC
AGCGTGCAGT TGCTTGAAGG TGGCAGCCGC AATATCGAAC AGGCGGTGCT CAGCGGGGAG
CTGGAGTTGG GTGGCAGTCT GCTGCCGAAG GATCCGCAAT TCGACTTTCA GCCGTTCTGT
GATGAACCGC TGGATGCGCT GCTTCCGGTG GATCACCCGC TGGCGGCAAA AGGCGAAATC
GGTCTGGAGG AACTGGCCGA TACGCCGTTC CTTTTGTATC AGCGCAGTTT CGTGCTCAAC
GATCGTTTGC TTCAGGCGTG CCAGCAAATG GGCTTCACGC CGAAAGAAGG CGGGCGCAGT
GGTCAGGCGG ATTTTCTCGC GGCGCTGGTC GCCGCCGGGC AGGGCGTGGT GTTGCTGCCC
AGCGTGGTGG CGCGCGGTCT GGTGCGGCCA GGCGTGGTGC GCCTGACCTT GAACGCGCCG
GACTACCTGC GCTGGGACAT CGCTTTCATC TGGCGCCGGG GCGCCTATCT GTCGAAGGCT
GCGCAGGCCT GGCTGGCGCT GCTGCGTGAA CGTGGAATCA GCCCTTGA
 
Protein sequence
MEFKQLRSFV EVMHQGGFTQ AAKTLHISQS AVSKQIAQLE QSLGTPLLER LGSQIRLTAA 
GSVVLHRAEG MLRLRNELLS ELDDLSQLAR GELRLGLPLL GSDALFAGLF AEYRRRYPNI
SVQLLEGGSR NIEQAVLSGE LELGGSLLPK DPQFDFQPFC DEPLDALLPV DHPLAAKGEI
GLEELADTPF LLYQRSFVLN DRLLQACQQM GFTPKEGGRS GQADFLAALV AAGQGVVLLP
SVVARGLVRP GVVRLTLNAP DYLRWDIAFI WRRGAYLSKA AQAWLALLRE RGISP