Gene Pfl01_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0884 
Symbol 
ID3715675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1031419 
End bp1032522 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_346616 
Protein GI77457111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.393971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGC AAGCCCTGTT CAAACCGTTC CAGCTCGGTG CCCTCGAACT GCCGACCCGC 
GTGGTCATGG CGCCGATGAC CCGTTCGTTT TCCCCGGGTG GCGTACCCAA TTCCAAAGTG
ATCGAATACT ACCGTCGTCG TGCGGCGGCC GGTGTCGGCC TGATCATCAC TGAAGGCACC
ACCGTTGGCC ACCAGGCTTC CAACGGTTAC CCGAACGTGC CGCACTTCTA CGGTGAAGCG
GCGTTGGCCG GCTGGAAAAA AGTCGTGGAG GCGGTACACG CAGAAGGCGG CAAGATCGTT
CCGCAACTGT GGCACGTCGG CAATGTGCGC CGTCTGGGCA CCGAGCCAGA CGCGAGCGTG
CCGGGTTACG GCCCGTCGGA AAAACTCAAG GACGGTCAGG TCGTCGTACA CCGCATGACC
AAACAGGACA TCCAGGACGT GATCGCAGCC TTCGCCCAAG CGGCGAAAGA TGCCCAAAGC
ATCGGCATGG ACGGCGTGGA AATCCACGGC GCCCACGGTT ACCTGATCGA CCAGTTCTTC
TGGGAAGGCA GCAATCAGCG CACTGACGAA TACGGTGGCA GCCTGGCCAA CCGTTCGCGT
TTCGCCATCG AGCTGATCCA GGCCGTACGC GCCGCTGTTG GCGAAGGCTT CCCGATCATC
TTCCGCTTCT CGCAGTGGAA ACAGCAGGAC TACACCGCGC GTCTGGTGCA AACCGCCGAA
GCGCTGGGCG AATTCCTCAA GCCGTTGTCC GACGCAGGCG TGGACATTTT CCACTGCTCG
ACGCGGCGTT TCTGGGAGCC GGAATTCGAC GGTTCCGACC TGAACCTGGC CGGCTGGACA
CGCAAACTGA CGGGCAAACC GACCATCACC GTCGGCAGCG TCGGCCTCGA TGGCGAGTTC
CTGCAGTTCA TGGTCAACAC CGACAAGGTC GCGCAACCGG CCAGTCTGGA AAAACTGCTG
GAGCGTCTGA ACAACGAAGA ATTCGATCTG GTGGCGGTGG GGCGTGCGCT GCTGGTCGAT
CCGGACTGGG CGCAGAAAGT GCGCGAAGGC CGCGAGCAGG ACATTCTGCC GTTCAGCCGT
GAGGCGTTGA TGACGCTGGT TTGA
 
Protein sequence
MPVQALFKPF QLGALELPTR VVMAPMTRSF SPGGVPNSKV IEYYRRRAAA GVGLIITEGT 
TVGHQASNGY PNVPHFYGEA ALAGWKKVVE AVHAEGGKIV PQLWHVGNVR RLGTEPDASV
PGYGPSEKLK DGQVVVHRMT KQDIQDVIAA FAQAAKDAQS IGMDGVEIHG AHGYLIDQFF
WEGSNQRTDE YGGSLANRSR FAIELIQAVR AAVGEGFPII FRFSQWKQQD YTARLVQTAE
ALGEFLKPLS DAGVDIFHCS TRRFWEPEFD GSDLNLAGWT RKLTGKPTIT VGSVGLDGEF
LQFMVNTDKV AQPASLEKLL ERLNNEEFDL VAVGRALLVD PDWAQKVREG REQDILPFSR
EALMTLV