Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0858 |
Symbol | |
ID | 3715591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1007152 |
End bp | 1007877 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_346590 |
Protein GI | 77457085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.320929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCC TGAAAGCTCA GCACCTGGCC AAGGCCTATA AAAGCCGCCA GGTCGTGCGT GACGTCAGCC TGTCGATCGA CAGCGGCCAG ATCGTCGGCC TGCTCGGTCC GAACGGTGCA GGCAAGACCA CCTGCTTCTA CATGATCGTC GGCCTGGTTC AGGCCGATCA AGGTCGCGTA CTGATCGACG ACCTGGACGT CAGCCACCAG CCGATGCATG GCCGTGCGAA GGCCGGTATC GGCTATCTGC CGCAAGAAGC GTCGATCTTC CGCAAACTGT CGGTGGCCGA CAACATCATG GCCATCCTCG AGACCCGTCA GGAACTCGAC AAGGCAGGTC GTCGCAAGGA GCTGGAAAGC CTGCTGCAGG AATTCCACAT CAGCCACATC CGCGACAACC TCGGCATGAG CCTGTCCGGT GGTGAGCGCC GCCGCGTGGA AATCGCCCGA GCGTTGGCCA CGGCACCGAA ATTCATCCTG CTCGACGAAC CGTTCGCCGG TGTCGACCCG ATCTCGGTCG GCGACATCAA GCAGATCATC CATCACCTCA AGGCCAAGGG GATCGGCGTA CTGATCACCG ACCACAACGT CCGCGAGACG CTGGATATCT GCGAAACCGC CTACATCGTC AACGACGGCC AGTTGATCGC CGAAGGCGAC TCAGAAACCA TCCTCGCCAA CAATCTGGTG AAGGAAGTCT ATCTGGGTCA CGAGTTCCGC CTGTAA
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Protein sequence | MATLKAQHLA KAYKSRQVVR DVSLSIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQADQGRV LIDDLDVSHQ PMHGRAKAGI GYLPQEASIF RKLSVADNIM AILETRQELD KAGRRKELES LLQEFHISHI RDNLGMSLSG GERRRVEIAR ALATAPKFIL LDEPFAGVDP ISVGDIKQII HHLKAKGIGV LITDHNVRET LDICETAYIV NDGQLIAEGD SETILANNLV KEVYLGHEFR L
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