Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0838 |
Symbol | |
ID | 3715551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 986267 |
End bp | 987304 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | rod shape-determining protein MreB |
Protein accession | YP_346570 |
Protein GI | 77457065 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00330287 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAAGA AACTGCGTGG CATGTTTTCC AGCGATCTTT CCATTGACCT GGGCACTGCC AACACCCTTA TTTACGTGCG CGAGCGCGGT ATCGTCCTGA ATGAGCCATC GGTTGTGGCC ATTCGGACAC ACGGTAACCA GAAAAGTGTC GTCGCTGTCG GCACCGAGGC CAAGCGCATG CTCGGCCGTA CGCCGGGCAA CATTGCTGCC ATTCGTCCGA TGAAGGACGG CGTGATCGCC GACTTCAGCG TCTGCGAAAA GATGCTGCAA TACTTTATCA ACAAGGTTCA CGAAAACAGC TTTCTGCAGC CCAGCCCTCG TGTGCTGATC TGCGTTCCAT GCAAGTCCAC CCAGGTTGAG CGTCGTGCCA TCCGTGAATC GGCCCTTGGC GCCGGTGCCC GTGAAGTGTT CCTGATCGAA GAGCCGATGG CGGCAGCGAT CGGTGCCGGC CTGCCGGTTG AAGAAGCTCG CGGTTCGATG GTCGTGGATA TCGGTGGTGG TACCACCGAA ATCGCGCTGA TCTCCCTGAA CGGTGTGGTC TATGCCGAGT CCGTACGTGT TGGCGGCGAC CGCTTCGACG AAGCGATCAT CACCTACGTG CGCCGCAACT ACGGCAGCCT GATCGGCGAA TCCACCGCCG AACGCATCAA GCAGGAAATC GGCACGGCCT ACCCGGGCGG CGAAGTTCGC GAAGTCGACG TTCGCGGCCG TAACCTGGCC GAAGGCGTTC CACGCGCATT CACCCTGAAC TCCAACGAAG TGCTGGAAGC TCTGCAAGAG TCGCTGGCGA CCATCGTTCA GGCGGTGAAA AGTGCTCTGG AGCAATCGCC GCCGGAACTG GCTTCCGACA TCGCCGAGCG TGGCCTGGTG CTGACCGGTG GTGGCGCGCT GCTGCGTGAC CTCGACAAGC TGCTGGCTCA GGAAACCGGT CTGCCGGTGA TCGTTGCCGA AGATCCGCTG ACCTGCGTCG CTCGCGGCGG TGGCCGTGCA TTGGAAATGA TGGACAAGCA CACCATGGAC CTGCTCTCCA GCGAATAA
|
Protein sequence | MFKKLRGMFS SDLSIDLGTA NTLIYVRERG IVLNEPSVVA IRTHGNQKSV VAVGTEAKRM LGRTPGNIAA IRPMKDGVIA DFSVCEKMLQ YFINKVHENS FLQPSPRVLI CVPCKSTQVE RRAIRESALG AGAREVFLIE EPMAAAIGAG LPVEEARGSM VVDIGGGTTE IALISLNGVV YAESVRVGGD RFDEAIITYV RRNYGSLIGE STAERIKQEI GTAYPGGEVR EVDVRGRNLA EGVPRAFTLN SNEVLEALQE SLATIVQAVK SALEQSPPEL ASDIAERGLV LTGGGALLRD LDKLLAQETG LPVIVAEDPL TCVARGGGRA LEMMDKHTMD LLSSE
|
| |