Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0836 |
Symbol | gatA |
ID | 3715549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 984300 |
End bp | 985751 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_346568 |
Protein GI | 77457063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0318775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAT TGACTCTGGC CGAGATCGCC CGCGGTCTCG CCGATAAAAA GTTTTCTTCC GAAGAGCTGA CCAAAGTCCT GCTGGCGCGT ATTACTCAGC TCGACCCGCA GCTCAACAGT TTCATCAGCC TCACCGAAGA GCTGGCCCTT GAGCAGGCGA AAGCCGCCGA CGTGCGCCGG GCCAATGGTG AGAGTGGCGC CCTGCTCGGT GCGCCGATCG CCCACAAGGA TCTGTTCTGC ACCCAGGGCA TCCGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCTCCATAC GACGCCACCG TGGTGTCGAA GCTGGCCGCC GCCGGCACCG TGACCCTGGG CAAGACCAAC ATGGACGAAT TCGCCATGGG TTCGGCCAAC GAGTCGAGCT GGTACGGCGC GGTGAAAAAC CCGTGGAACC TGGAACACGT GCCGGGCGGT TCGTCCGGTG GTTCGGCTGC CGCGGTTGCC GCTCGTCTGT TGCCTGCCGC AACGGCCACC GACACCGGCG GTTCGATCCG TCAGCCAGCA GCATTCACCA ACCTCACCGG CCTGAAACCG ACCTACGGTC GCGTGTCGCG CTGGGGCATG ATCGCTTACG CCTCCAGCCT CGATCAGGGC GGCCCGCTGG CTCGCACCGC CGAAGACTGC GCGATTTTGT TGCAAGGTAT GGCCGGCTTC GATCCGAACG ACTCCACCAG CATCGATGAG CCAGTGCCGG ACTACGCCGC CGGCCTGAAT GGTTCGCTGC AAGGACTGCG TATCGGCGTG CCGAAGGAAT ACTTCGGTGC CGGTCTCGAC CCGCGCATCG CCGACCTGAT CCAGAACAGC ATCAAGGAGC TGCAGAAGCT CGGTGCTGTG ATCAAGGAAA TCAGCCTGCC GAACATGCAG CACGCGATCC CTGCGTACTA CGTGATCGCC CCGGCAGAAG CCTCCTCCAA CCTGTCGCGT TTCGACGGCG TGCGCTTCGG CCACCGCTGC GCAGACCCGA AGAACCTGGA AGACCTGTAC AAGCGCTCCC GTGGCGAAGG CTTCGGGCCT GAAGTGCAGC GCCGGATCAT GGTCGGTGCC TACGCGCTGT CCGCCGGTTA CTACGACGCC TACTACCTGA AAGCGCAGAA GATCCGTCGC CTGGTGAAGA ACGACTTCAT GGCTGCCTTT AATGAAGTCG ACATCATCCT CGGCCCGACC ACGCCAAACC CGGCCTGGAA ACTCGGTGCC AAGAACAGCG ACCCGGTCGC CGCCTACCTG GAAGACGTCT ACACCATCAC CGCCAACCTC GCGGGCCTGC CGGGCCTGTC GATGCCGGCC GGTTTCGTCG ACGGCCTGCC GGTCGGCGTG CAACTGCTCG CTCCGTATTT CCAGGAAGGC CGTTTGCTCA ATGTTGCGCA CCAGTATCAG TTGAACACTG ACTGGCACAC CCGCACCCCA ACCGGCTTCT GA
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Protein sequence | MHQLTLAEIA RGLADKKFSS EELTKVLLAR ITQLDPQLNS FISLTEELAL EQAKAADVRR ANGESGALLG APIAHKDLFC TQGIRTSCGS KMLDNFKAPY DATVVSKLAA AGTVTLGKTN MDEFAMGSAN ESSWYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPAATAT DTGGSIRQPA AFTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC AILLQGMAGF DPNDSTSIDE PVPDYAAGLN GSLQGLRIGV PKEYFGAGLD PRIADLIQNS IKELQKLGAV IKEISLPNMQ HAIPAYYVIA PAEASSNLSR FDGVRFGHRC ADPKNLEDLY KRSRGEGFGP EVQRRIMVGA YALSAGYYDA YYLKAQKIRR LVKNDFMAAF NEVDIILGPT TPNPAWKLGA KNSDPVAAYL EDVYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHQYQ LNTDWHTRTP TGF
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