Gene Pfl01_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0816 
Symbol 
ID3715433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp963112 
End bp964713 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content59% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_346548 
Protein GI77457043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAT TCACCCTCAA ACCACTTCTA ATAACCCTGA CCCTGACCGC CATAACCCCA 
ATCGCCAACG CAGCCACAAC CCTCGTCTAC TGCTCCGAAG CCAGCCCCGC AGGCTTCGAC
CCCAGCCAAT ACACCAGCGG CACCGACTTC GATGCCTCCG CCGAAACCGT CTTCAACCGC
CTCACCCAAT TCAAACGCGG CGGCACCGAA GTCGAACCCG GTCTGGCGAC CAAATGGGAC
GTAAGCCCGG ACGGCCTCCA GTACACCTTC CACCTGCGCC AAAACGTAAA ATTCCACACC
ACCGACTACT TCACCCCAAC CCGAACCTTC AACGCCGACG ACGTCCTCTT CACCTTCCAG
CGCCTGCTCG ACCCGGAGAA CGCCTTTCGC AAGGCCTACC CCGCCGAATC CCCGTACTTC
ACCGACATGG GCCTGAACAC CACGATCAAA TCCGTGGAAA AACTCGACGA CAACACCGTG
CGCTTCAATC TCAACAACGT GGACGCCGCG TTCGTGCAAA ACCTCGCCAT GAGCTTCGCC
TCGGTGCAAT CGGCCGAATA CGCAGCCCAA CTACTGAAGG AAGGCCACGC CGCCGACCTC
AACCAGAAAC CGGTCGGCAC CGGCCCGTTC GTGTTCAAGC GCTATCAGAA GGACGCGCAG
ATCCGCTACG CAGCGAACAA GGACTACTGG AAACCCGAGG ACGTGAAGCT CGATAACCTG
GTGTTCTCGA TCACCCCGGA CGCCGCCGTA CGCCTGCAAA AGCTCAAGAC CGGCGAATGC
CAGGTCAGCG GTTACCCGCG CCCCGCCGAT ATCGAAGTGA TGGAAAAAGA CCCGAACCTG
CGGGTGTTGA AGCAGCCCGG TTTCAACCTC GGCTTCCTCG CCTACAACAC CACCCATCCG
CCGCTGGATC AGCTCAAAGT GCGCCAGGCG CTGGACATGG CTATCGACAA ACCAGCGATC
ATCAAGGCTG TTTACCAGAG TGCCGGGCAG CTGGCGCAGA ACGCCTTGCC GCCAGCGCAA
TGGTCATTTG ATCCGAACAT AAAAGACGCG CCGCACGACC CGGTAAAAGC CAAGGCGCTA
CTCAAGGAAG CCAGGGTTGC ACCGGGTACA ACCATCAACC TCTGGGCCAT GACCGTGCAG
CGCGCCTCGA ACCCGAATGC GCGGATGTCG GCACAGATGA TCCAGCAGGA TTGGGAGAAA
ATCGGTATCA AGGCCAACAT CGTCAGTTAC GAATGGGGCG AGTACATCAA GCGCGCCAAG
AACGGCGAGC ACGACGCGAT GATCTACGGC TGGACCGGTG ACAACGGCGA CCCCGACAAC
TGGCTGGGCG TGCTTTACAG CTGCGCGGCG GTGAAGGGCA GCAACTACGC CAAATGGTGC
GATCCGGCCT ATGACAAGCT GGTACAGCAG GCCAAGGTAT CCACCGATAA ATCGCAACGG
GTAAAACTGT ATCAACAGGC GCAACTGATC CTTAAACAGC AGGTGCCGAT CACGCCGATC
GCCAACTCCA CGGTGTTCCA GCCGCTGCGC AAGGAAGTCA CTGACTTCAA GATCAGCCCG
TTCGGTCTAA CCCCCTTCTA TGGCGTGGGT ATAAATAAGT AA
 
Protein sequence
MDRFTLKPLL ITLTLTAITP IANAATTLVY CSEASPAGFD PSQYTSGTDF DASAETVFNR 
LTQFKRGGTE VEPGLATKWD VSPDGLQYTF HLRQNVKFHT TDYFTPTRTF NADDVLFTFQ
RLLDPENAFR KAYPAESPYF TDMGLNTTIK SVEKLDDNTV RFNLNNVDAA FVQNLAMSFA
SVQSAEYAAQ LLKEGHAADL NQKPVGTGPF VFKRYQKDAQ IRYAANKDYW KPEDVKLDNL
VFSITPDAAV RLQKLKTGEC QVSGYPRPAD IEVMEKDPNL RVLKQPGFNL GFLAYNTTHP
PLDQLKVRQA LDMAIDKPAI IKAVYQSAGQ LAQNALPPAQ WSFDPNIKDA PHDPVKAKAL
LKEARVAPGT TINLWAMTVQ RASNPNARMS AQMIQQDWEK IGIKANIVSY EWGEYIKRAK
NGEHDAMIYG WTGDNGDPDN WLGVLYSCAA VKGSNYAKWC DPAYDKLVQQ AKVSTDKSQR
VKLYQQAQLI LKQQVPITPI ANSTVFQPLR KEVTDFKISP FGLTPFYGVG INK