Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0816 |
Symbol | |
ID | 3715433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 963112 |
End bp | 964713 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_346548 |
Protein GI | 77457043 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCGAT TCACCCTCAA ACCACTTCTA ATAACCCTGA CCCTGACCGC CATAACCCCA ATCGCCAACG CAGCCACAAC CCTCGTCTAC TGCTCCGAAG CCAGCCCCGC AGGCTTCGAC CCCAGCCAAT ACACCAGCGG CACCGACTTC GATGCCTCCG CCGAAACCGT CTTCAACCGC CTCACCCAAT TCAAACGCGG CGGCACCGAA GTCGAACCCG GTCTGGCGAC CAAATGGGAC GTAAGCCCGG ACGGCCTCCA GTACACCTTC CACCTGCGCC AAAACGTAAA ATTCCACACC ACCGACTACT TCACCCCAAC CCGAACCTTC AACGCCGACG ACGTCCTCTT CACCTTCCAG CGCCTGCTCG ACCCGGAGAA CGCCTTTCGC AAGGCCTACC CCGCCGAATC CCCGTACTTC ACCGACATGG GCCTGAACAC CACGATCAAA TCCGTGGAAA AACTCGACGA CAACACCGTG CGCTTCAATC TCAACAACGT GGACGCCGCG TTCGTGCAAA ACCTCGCCAT GAGCTTCGCC TCGGTGCAAT CGGCCGAATA CGCAGCCCAA CTACTGAAGG AAGGCCACGC CGCCGACCTC AACCAGAAAC CGGTCGGCAC CGGCCCGTTC GTGTTCAAGC GCTATCAGAA GGACGCGCAG ATCCGCTACG CAGCGAACAA GGACTACTGG AAACCCGAGG ACGTGAAGCT CGATAACCTG GTGTTCTCGA TCACCCCGGA CGCCGCCGTA CGCCTGCAAA AGCTCAAGAC CGGCGAATGC CAGGTCAGCG GTTACCCGCG CCCCGCCGAT ATCGAAGTGA TGGAAAAAGA CCCGAACCTG CGGGTGTTGA AGCAGCCCGG TTTCAACCTC GGCTTCCTCG CCTACAACAC CACCCATCCG CCGCTGGATC AGCTCAAAGT GCGCCAGGCG CTGGACATGG CTATCGACAA ACCAGCGATC ATCAAGGCTG TTTACCAGAG TGCCGGGCAG CTGGCGCAGA ACGCCTTGCC GCCAGCGCAA TGGTCATTTG ATCCGAACAT AAAAGACGCG CCGCACGACC CGGTAAAAGC CAAGGCGCTA CTCAAGGAAG CCAGGGTTGC ACCGGGTACA ACCATCAACC TCTGGGCCAT GACCGTGCAG CGCGCCTCGA ACCCGAATGC GCGGATGTCG GCACAGATGA TCCAGCAGGA TTGGGAGAAA ATCGGTATCA AGGCCAACAT CGTCAGTTAC GAATGGGGCG AGTACATCAA GCGCGCCAAG AACGGCGAGC ACGACGCGAT GATCTACGGC TGGACCGGTG ACAACGGCGA CCCCGACAAC TGGCTGGGCG TGCTTTACAG CTGCGCGGCG GTGAAGGGCA GCAACTACGC CAAATGGTGC GATCCGGCCT ATGACAAGCT GGTACAGCAG GCCAAGGTAT CCACCGATAA ATCGCAACGG GTAAAACTGT ATCAACAGGC GCAACTGATC CTTAAACAGC AGGTGCCGAT CACGCCGATC GCCAACTCCA CGGTGTTCCA GCCGCTGCGC AAGGAAGTCA CTGACTTCAA GATCAGCCCG TTCGGTCTAA CCCCCTTCTA TGGCGTGGGT ATAAATAAGT AA
|
Protein sequence | MDRFTLKPLL ITLTLTAITP IANAATTLVY CSEASPAGFD PSQYTSGTDF DASAETVFNR LTQFKRGGTE VEPGLATKWD VSPDGLQYTF HLRQNVKFHT TDYFTPTRTF NADDVLFTFQ RLLDPENAFR KAYPAESPYF TDMGLNTTIK SVEKLDDNTV RFNLNNVDAA FVQNLAMSFA SVQSAEYAAQ LLKEGHAADL NQKPVGTGPF VFKRYQKDAQ IRYAANKDYW KPEDVKLDNL VFSITPDAAV RLQKLKTGEC QVSGYPRPAD IEVMEKDPNL RVLKQPGFNL GFLAYNTTHP PLDQLKVRQA LDMAIDKPAI IKAVYQSAGQ LAQNALPPAQ WSFDPNIKDA PHDPVKAKAL LKEARVAPGT TINLWAMTVQ RASNPNARMS AQMIQQDWEK IGIKANIVSY EWGEYIKRAK NGEHDAMIYG WTGDNGDPDN WLGVLYSCAA VKGSNYAKWC DPAYDKLVQQ AKVSTDKSQR VKLYQQAQLI LKQQVPITPI ANSTVFQPLR KEVTDFKISP FGLTPFYGVG INK
|
| |