Gene Pfl01_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0787 
Symbol 
ID3715364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp924598 
End bp925158 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_346519 
Protein GI77457014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.149911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGG ATCCCGCAAG CGGGTGGTGT CACGGGGTGC AGGTCTGCCC TTCGCCCAAC 
TTCAATGAAC GCCCGGCGGG CGAAGTCTCC CTGTTGGTCA TCCACAACAT CAGCTTGCCA
CCGGCGCAGT TCGCCACCGG CAAGGTCCAG GAATTTTTCC AGAATCGTCT GGATGTCACG
GAACATCCCT ACTTTGCCGG GATCGCCGAC CTGCGCGTGT CTGCGCATTT TCTGATCGAA
CGTGACGGCA AGGTCACCCA GTTTGTCTCC TGTCTTGAGC GTGCCTGGCA TGCCGGTGTT
TCGGTGTTCG AAGGACGGGA AACCTGTAAC GATTTTTCCG TGGGCATCGA GCTGGAAGGC
ACCGATGATC TGCCGTTCAC CGATGCGCAG TACCAGGCGT TGACCGTGCT GACCCGGCAG
ATACAGGCGG CGTTCCCGGC GATCACCGTC GAGCGCATCT GCGGGCACAG CGACATCGCC
CCCGGACGCA AGACCGACCC CGGACCCGCA TTCGACTGGG CACGCTACCG CGCCGCCCTG
GCACAAGAGG AAGGACAATG A
 
Protein sequence
MQLDPASGWC HGVQVCPSPN FNERPAGEVS LLVIHNISLP PAQFATGKVQ EFFQNRLDVT 
EHPYFAGIAD LRVSAHFLIE RDGKVTQFVS CLERAWHAGV SVFEGRETCN DFSVGIELEG
TDDLPFTDAQ YQALTVLTRQ IQAAFPAITV ERICGHSDIA PGRKTDPGPA FDWARYRAAL
AQEEGQ