| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0782 |
|---|
| Symbol | rpsO |
|---|
| ID | 3715358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 917878 |
|---|
| End bp | 918147 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_346514 |
|---|
| Protein GI | 77457009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00988358 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.116943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTCG ACGTTCAAGA AAAAGCTCAA ATCGTTGCCG ACTACCAGCA AGCCGTTGGT
GACACTGGTT CGCCAGAAGT GCAAGTTGCA CTGCTGACCG CCAACATCAA CAAACTGCAA
GGTCACTTCA AGGCCAACGG TAAAGACCAC CACTCCCGTC GTGGTCTGAT CCGCATGGTT
AACCAGCGTC GCAAGCTGCT GGACTACCTG AAAGGCAAGG ACGTGAGCCG TTACAGCGCT
CTGATCGCTC GCCTGGGTCT GCGTCGCTAA
|
|---|
| Protein sequence | MALDVQEKAQ IVADYQQAVG DTGSPEVQVA LLTANINKLQ GHFKANGKDH HSRRGLIRMV
NQRRKLLDYL KGKDVSRYSA LIARLGLRR
|
|---|
| |