Gene Pfl01_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0781 
SymboltruB 
ID3715357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp916819 
End bp917736 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_346513 
Protein GI77457008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00899616 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.133836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCAGG TCAAACGTAT CCGTCGTAAC GTCAGCGGCA TCATCCTGCT CGACAAGCCG 
CTGGGGTTCA CCTCCAACGC AGCCTTGCAG AAGGTTCGCT GGTTGCTCAA CGCCGAAAAG
GCCGGTCACA CCGGCAGTCT CGACCCTCTG GCCACCGGCG TGCTGCCGTT GTGCTTTGGC
GAGGCGACCA AGTTCTCGCA GTACCTGCTC GATTCCGACA AGGGTTACGA AACCCTGGCG
CAACTGGGCA AGACCACCAC CACGGCAGAC GCCGAAGGTG AGGTTTTGCA GGAACGTCCG
GTGACCGTTG GTCAGGCCGA CATTGAAGCG GTTCTGCCGA AATTTCGTGG GCAAATCAGT
CAGATACCGC CGATGTACTC GGCTCTCAAG CGTGATGGCC AGCCCCTGTA CAAGTTGGCC
CGTGCTGGCG AAGTAGTGGA GCGCGAACCG CGTTCTGTTA CTATTGCGCG CTTGGAATTG
CTGGCCTTCG AAGGCGATAC TGCGCGTCTT GCGGTGGATT GCAGCAAGGG CACCTATATT
CGCACCCTGG TGGAGGATAT CGGTGAGCAA CTCGGTTGTG GTGCGTACGT CGCTGAACTG
CGTCGTACCC AGGCCGGGCC TTTCACCCTG GCGCAGACCG TGACCCTCGA AGAGCTGGAA
GCGGTACATG CCGAAGGCGG CAACGAAGCG GTCGACCGCT TCCTGATGCC ATCGGACAGC
GGCCTGCAGG ATTGGCCGTT GCTGCAGTTC TCGGAAGCGA GCGCGTTCTA CTGGCTCAAC
GGCCAGCCGG TACGTGCCCC GGATGCTCCG AAGTTCGGCA TGGTGCGGGT ACAGGATCAC
AACGGTCGCT TCATCGGTAT CGGTGAAGTG AGCGAAGACG GGCGCATCGC GCCGCGTCGA
CTGATTCGGT CAGAATGA
 
Protein sequence
MAQVKRIRRN VSGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG 
EATKFSQYLL DSDKGYETLA QLGKTTTTAD AEGEVLQERP VTVGQADIEA VLPKFRGQIS
QIPPMYSALK RDGQPLYKLA RAGEVVEREP RSVTIARLEL LAFEGDTARL AVDCSKGTYI
RTLVEDIGEQ LGCGAYVAEL RRTQAGPFTL AQTVTLEELE AVHAEGGNEA VDRFLMPSDS
GLQDWPLLQF SEASAFYWLN GQPVRAPDAP KFGMVRVQDH NGRFIGIGEV SEDGRIAPRR
LIRSE