Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0781 |
Symbol | truB |
ID | 3715357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 916819 |
End bp | 917736 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_346513 |
Protein GI | 77457008 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00899616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.133836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCAGG TCAAACGTAT CCGTCGTAAC GTCAGCGGCA TCATCCTGCT CGACAAGCCG CTGGGGTTCA CCTCCAACGC AGCCTTGCAG AAGGTTCGCT GGTTGCTCAA CGCCGAAAAG GCCGGTCACA CCGGCAGTCT CGACCCTCTG GCCACCGGCG TGCTGCCGTT GTGCTTTGGC GAGGCGACCA AGTTCTCGCA GTACCTGCTC GATTCCGACA AGGGTTACGA AACCCTGGCG CAACTGGGCA AGACCACCAC CACGGCAGAC GCCGAAGGTG AGGTTTTGCA GGAACGTCCG GTGACCGTTG GTCAGGCCGA CATTGAAGCG GTTCTGCCGA AATTTCGTGG GCAAATCAGT CAGATACCGC CGATGTACTC GGCTCTCAAG CGTGATGGCC AGCCCCTGTA CAAGTTGGCC CGTGCTGGCG AAGTAGTGGA GCGCGAACCG CGTTCTGTTA CTATTGCGCG CTTGGAATTG CTGGCCTTCG AAGGCGATAC TGCGCGTCTT GCGGTGGATT GCAGCAAGGG CACCTATATT CGCACCCTGG TGGAGGATAT CGGTGAGCAA CTCGGTTGTG GTGCGTACGT CGCTGAACTG CGTCGTACCC AGGCCGGGCC TTTCACCCTG GCGCAGACCG TGACCCTCGA AGAGCTGGAA GCGGTACATG CCGAAGGCGG CAACGAAGCG GTCGACCGCT TCCTGATGCC ATCGGACAGC GGCCTGCAGG ATTGGCCGTT GCTGCAGTTC TCGGAAGCGA GCGCGTTCTA CTGGCTCAAC GGCCAGCCGG TACGTGCCCC GGATGCTCCG AAGTTCGGCA TGGTGCGGGT ACAGGATCAC AACGGTCGCT TCATCGGTAT CGGTGAAGTG AGCGAAGACG GGCGCATCGC GCCGCGTCGA CTGATTCGGT CAGAATGA
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Protein sequence | MAQVKRIRRN VSGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG EATKFSQYLL DSDKGYETLA QLGKTTTTAD AEGEVLQERP VTVGQADIEA VLPKFRGQIS QIPPMYSALK RDGQPLYKLA RAGEVVEREP RSVTIARLEL LAFEGDTARL AVDCSKGTYI RTLVEDIGEQ LGCGAYVAEL RRTQAGPFTL AQTVTLEELE AVHAEGGNEA VDRFLMPSDS GLQDWPLLQF SEASAFYWLN GQPVRAPDAP KFGMVRVQDH NGRFIGIGEV SEDGRIAPRR LIRSE
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