Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0765 |
Symbol | dapB |
ID | 3715223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 898270 |
End bp | 899076 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | dihydrodipicolinate reductase |
Protein accession | YP_346497 |
Protein GI | 77456992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0122187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.374891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGTA TAGCTGTGAT GGGCGCTGCC GGGCGCATGG GCAAGATTCT GGTCGAGGCG GTGCAGCAGC GCGCGCCACT GACCGGTCTG ACGGCCGCGA TTGTCCGCCC TGGCAGTACG CTGATCGGTG TGGATGCCGG TGAGCTGGCT TCGCTCGGTC GAATCGGCGT GCCGCTGTCC GGGAATCTGG AATCAGTGGC GGAAGAGTTC GATGTGTTGA TCGACTTCAC CCTGCCGGAA GTGATGCTGA AAAACCTGGC CTTCTGCCGC AAGGCCGGCA AGGCGATGGT GATCGGCACG ACCGGGCTGG ACGCTGCGCA GAAGCAGTTG CTGGCCGAGG CGGGCAAGGA TATTCCGATC GTGTTCGCCG CCAACTTCAG TGTCGGCGTC AACCTGTCGC TGAAGCTGCT CGACATGGCG GCACGGGTGT TGGCGGAAGA TGCGGACATC GAAATCATCG AAGCCCATCA CCGGCACAAG ATTGATGCGC CGTCGGGTAC GGCCTTGCGC ATGGGTGAAG TGATCGCCAA TGCGCTGGAT CGTGATCTGC AGAAAGTCGC GGTCTATGGT CGTGAAGGCC ACACTGGTGC CCGTGAGCGT GAAACTATCG GCTTTGCCAC TGTTCGCGGT GGTGATGTAG TGGGCGATCA CACGGTGTTG TTTGCCTGCG AGGGCGAGCG GCTGGAGATC ACGCACAAGG CTTCGAGTCG CATGACATTC GCCAAGGGCG CGGTGCGTGC GGCGTTGTGG CTGGATGCTC GCGAGCCTGG TTTGTACGAC ATGCAGGACG TGCTCGGCCT GCATTGA
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Protein sequence | MRRIAVMGAA GRMGKILVEA VQQRAPLTGL TAAIVRPGST LIGVDAGELA SLGRIGVPLS GNLESVAEEF DVLIDFTLPE VMLKNLAFCR KAGKAMVIGT TGLDAAQKQL LAEAGKDIPI VFAANFSVGV NLSLKLLDMA ARVLAEDADI EIIEAHHRHK IDAPSGTALR MGEVIANALD RDLQKVAVYG REGHTGARER ETIGFATVRG GDVVGDHTVL FACEGERLEI THKASSRMTF AKGAVRAALW LDAREPGLYD MQDVLGLH
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