| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0763 |
|---|
| Symbol | dnaK |
|---|
| ID | 3715221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 894922 |
|---|
| End bp | 896838 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | molecular chaperone DnaK |
|---|
| Protein accession | YP_346495 |
|---|
| Protein GI | 77456990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.240702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.419726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAA TTATCGGTAT CGACCTGGGG ACTACCAACT CCTGCGTCTC CGTGCTGGAA
AACGGCAAAG CCAAAGTTAT TGAGAACGCT GAAGGCGCGC GCACCACGCC GTCGATCATC
GCTTACGCCA ACGATGGCGA AATCCTGGTC GGTCAGTCGG CCAAGCGTCA GGCTGTGACC
AACCCGCACA ACACCCTTTT CGCAGTGAAG CGTCTGATCG GTCGCCGCTT CGAAGAAGAA
GTTGTACAGA AAGACATCAA GCTGGTGCCT TACAAGATCG TCAAGGCTAA CAATGGTGAC
GCTTGGGTCG AGGCCTCCGG CAAGCAGATG GCTCCGCCGC AAATCAGCGC CGAAGTCCTG
AAAAAGATGA AGAAGACCGC CGAAGACTAT CTCGGTGAGG CTGTGACCGA AGCGGTGATC
ACCGTTCCGG CGTACTTCAA CGACAGTCAG CGTCAGGCAA CTAAAGATGC TGGCCGCATC
GCCGGTCTGG ACGTAAAACG TATCATCAAT GAACCGACCG CTGCTGCTCT GGCTTACGGT
ATGGACAAGG CCAAGGGCGA TCACACCGTG ATCGTTTACG ACCTCGGTGG TGGTACTTTC
GACGTCTCCG TGATCGAGAT CGCTGAAGTT GACGGCGAGC ACCAGTTCGA AGTGCTGGCC
ACCAACGGCG ACACCTTCCT GGGTGGCGAA GACTTCGACA TGCGCCTGAT CGACTACCTC
GTCGACGAGT TCAAGAAAGA GTCCGGCATG GACCTGAAGA ACGATCCTCT GGCCCTGCAG
CGTCTGAAAG AAGCCGCTGA GAAAGCCAAG ATCGAGCTGT CTTCCTCGCA GTCGACCGAC
GTCAACCTGC CGTACATTAC TGCAGACGCG ACCGGTCCGA AGCATCTGAA TGTGAAGATC
TCCCGTGCCA AGCTCGAATC GCTGGTTGAA GATCTGGTGA CTCGTACCAT CGAGCCATGC
CGCATTGCTC TGAAAGACGC CGGCATCGAC GCCAGCAAGA TTGACGACGT GATCCTGGTC
GGCGGTCAGA CCCGTATGCC GATGGTGCAG AAAGCTGTTT CGGATTTCTT CGGTAAAGAA
GCACGTAAAG ACGTGAACCC GGACGAAGCT GTTGCCATGG GTGCTGCGAT CCAGGGCGCC
GTTCTGGCCG GTGACGTGAA AGACGTTCTG CTGCTCGACG TCAGCCCGCT GACCCTGGGT
ATCGAAACCA TGGGTGGCGT GATGACCGCG CTGATCGAGA AAAACACCAC GATTCCTACC
AAGAAATCGC AAGTGTTCTC GACGGCCGAC GACAACCAGG GCGCCGTGAC CATTCACGTC
CTGCAAGGCG AGCGCAAGCA AGCCGCACAG AACAAGTCCT TGGGCAAGTT CGACCTGGCC
GATATTCCAC CTGCTCCACG TGGTGTGCCG CAGATCGAAG TGACCTTCGA CATCGACGCC
AACGGCATCC TGCACGTAGG TGCGAAGGAC AAGGCGACTG GCAAAGAGCA GAAGATCACC
ATCAAGGCCA ACTCTGGTCT GTCGGATGAA GAAATCCAGA AGATGGTGCG CGACGCCGAG
CTGAACGCCG AGGAAGACCG CAAGTTCGAA GAGCTGGCCG CTGCCCGTAA CCAGGGTGAT
GCACTGGTTC ACTCGACTCG CAAGATGATC GCCGACGCTG GCGACAAAGT GACTGCAGAA
GAGAAGACTG CAATCGAAGC GGCTGTGGTT GCCCTGGAAG CTGCCGTCAA AGGCGACGAC
AAGGCTGCCA TTGACGCCAA GGTTGAAGAG CTGTCGAAAG TCTCTGCACC GGTTGCTCAG
AAGATGTACG CCGAACAGGC TCAGCCTGCT GAAGGCGCAG CACCGCACGA CGAGAAAGCT
GAAAAGGCTG ACGATGTTGT TGATGCCGAG TTCGAAGAAG TCAAAGACCA CAAGTAA
|
|---|
| Protein sequence | MGKIIGIDLG TTNSCVSVLE NGKAKVIENA EGARTTPSII AYANDGEILV GQSAKRQAVT
NPHNTLFAVK RLIGRRFEEE VVQKDIKLVP YKIVKANNGD AWVEASGKQM APPQISAEVL
KKMKKTAEDY LGEAVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAYG
MDKAKGDHTV IVYDLGGGTF DVSVIEIAEV DGEHQFEVLA TNGDTFLGGE DFDMRLIDYL
VDEFKKESGM DLKNDPLALQ RLKEAAEKAK IELSSSQSTD VNLPYITADA TGPKHLNVKI
SRAKLESLVE DLVTRTIEPC RIALKDAGID ASKIDDVILV GGQTRMPMVQ KAVSDFFGKE
ARKDVNPDEA VAMGAAIQGA VLAGDVKDVL LLDVSPLTLG IETMGGVMTA LIEKNTTIPT
KKSQVFSTAD DNQGAVTIHV LQGERKQAAQ NKSLGKFDLA DIPPAPRGVP QIEVTFDIDA
NGILHVGAKD KATGKEQKIT IKANSGLSDE EIQKMVRDAE LNAEEDRKFE ELAAARNQGD
ALVHSTRKMI ADAGDKVTAE EKTAIEAAVV ALEAAVKGDD KAAIDAKVEE LSKVSAPVAQ
KMYAEQAQPA EGAAPHDEKA EKADDVVDAE FEEVKDHK
|
|---|
| |