Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0755 |
Symbol | smpB |
ID | 3715213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 888415 |
End bp | 888897 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | SsrA-binding protein |
Protein accession | YP_346487 |
Protein GI | 77456982 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.609664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.307584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAC AGAAGAAACA CCCAACAGGG ACCATCGCGC AAAACAAAAA AGCGCGACAC GATTACTTCA TCGAGCACAA GTTCGAGGCT GGTCTGGTCC TGGCCGGCTG GGAAGTAAAA AGTCTGCGGG CAAGCAAACT GCAACTGGTC GACAGTTACG TGTTGCTCAA GGATGGCGAA GCCTGGTTGC TCGGCAGCCA CATCACGCCT CTGATGACCG CCAGCACCCA CGTCATTGCC GACCCGGTGC GTACCCGCAA GTTGCTGCTC AACCGCCGCG AACTGGACAA GCTCGCCGCC GCCGTGCAGC AAAAGGGTTA CGCCTGCGTG TGCCTGTCCT GGTACTGGAG CAAGCACATG GTCAAGTGCG AGATTGCTCT CGGCAAGGGC AAGAAGGAAT ACGACAAGCG CGATACCGAA CGCGAACGCG ACGCCGGTCG CGAGTTGCAG CGTGCGGTGC GCAACAAGGG CAAGGAAGAC TGA
|
Protein sequence | MAKQKKHPTG TIAQNKKARH DYFIEHKFEA GLVLAGWEVK SLRASKLQLV DSYVLLKDGE AWLLGSHITP LMTASTHVIA DPVRTRKLLL NRRELDKLAA AVQQKGYACV CLSWYWSKHM VKCEIALGKG KKEYDKRDTE RERDAGRELQ RAVRNKGKED
|
| |