| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0754 |
|---|
| Symbol | |
|---|
| ID | 3715212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 887597 |
|---|
| End bp | 888364 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_346486 |
|---|
| Protein GI | 77456981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.393325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.323423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTTG ATCAGATACG TCAGCGCCGT TTGTCTGATG ACATTGTCGA GCGACTGGAA
GGGATGATTC TCGAGGGCAC GCTGAAGTCC GGCGAGCGTC TGCCGGCCGA GCGGGCACTG
GCGGAGCAGT TCGGCGTTTC CCGGCCTTCG TTGCGCGAGG CGATTCAGAA ACTGGCGGCC
AAGGGCTTGC TGGTCAGCAA GCAGGGCGGC GGCAACTATG TTGTGGAAAG CCTCGGTTCG
ACGTTCAGCG ATCCGCTGCT GCAATTGCTG GAAAGCAATC CCGAGGCACA GCGCGATCTG
CTGGAATTTC GTCACACACT GGAGGCATCG TGCGCCTATT ACGCAGCGTT GCGCGCCACA
GACGTGGATC GTGAACGGCT GACGGCGGCG TTTGAAGAGT TACAGGATTG CTATTCGCGT
CACGATGAAG TGAGCCGGGC GGAAGAGGGT GCGGCGGATG CGAAATTCCA CCTGGCGATT
GCCGAAGCCA GTCACAACGC AGTGTTGCTG CACACCATTC GCGGCTTGTT CGATCTGCTC
AAGCGTAACG TGGTGACCAA CATCGGTGGC ATGTACAAGC AGCGCACGGA AACCCGCGAC
ATGCTGATCA CCCAGCATCG GGAATTGTAT CTGGCGATTA TCGAGGGGCG CGCGGAGCAG
GCGCGTGAGG TCTCCAGCCG ACACATTCTG TATGTGCAGG AAGTGCTGGA AGAAGTGCGA
CAGGAAGTGC AGCGCATGGC TCGCGCCGAG CGACGCAAAG GGATGTAA
|
|---|
| Protein sequence | MGFDQIRQRR LSDDIVERLE GMILEGTLKS GERLPAERAL AEQFGVSRPS LREAIQKLAA
KGLLVSKQGG GNYVVESLGS TFSDPLLQLL ESNPEAQRDL LEFRHTLEAS CAYYAALRAT
DVDRERLTAA FEELQDCYSR HDEVSRAEEG AADAKFHLAI AEASHNAVLL HTIRGLFDLL
KRNVVTNIGG MYKQRTETRD MLITQHRELY LAIIEGRAEQ AREVSSRHIL YVQEVLEEVR
QEVQRMARAE RRKGM
|
|---|
| |