Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0749 |
Symbol | |
ID | 3715207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 879725 |
End bp | 882547 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | FAD linked oxidase-like |
Protein accession | YP_346481 |
Protein GI | 77456976 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.492888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTTAC CGGCGACTTT CCTGCGCGAT GCGCAGCAAT TGATTCCTGC CGAACGGCGT TTCGACGATC CGCTGTCGAC CCTGGCCTTC GGCACCGATG CCAGTTTCTA CCGATTGATT CCGCAACTGG TGATTCGCGT CGAATCCGAA GACGAAGTGG TGGCGCTGCT GAAACTGGCC CAGCGCGATC AAGTCCCGGT GACCTTCCGC GCCGCCGGCA CCAGCCTGTC CGGCCAGGCG ATCAGTGATT CGGTGTTGAT CGTGCTTGGG GATAACTGGA ACGCTCGTGA AATTCGCGGC CAGGGCACGC AGATCCGCCT GCAACCCGGC GTAATCGGTG CCCAGGCCAA TGCATGGCTG GCGCCATTCG GGCGCAAGAT CGGTCCGGAT CCGGCGTCGA TCAACGCCTG CAAGATCGGC GGCATTGTCG CCAACAACGC CAGCGGCATG TGCTGCGGCA CCGCGCAAAA CACCTATCAC ACGCTGGCCG GAATTCGTCT GGTGCTGGCC GATGGCACAC GTCTCGACAC TGAAGATGCC GCCAGTGTCG CGGCGTTTCG AGTCAGCCAC GGTGACTTGC TGGAACGTCT GGCGACTTTG GGCCGCGAGA CCCGCGCCAA TGCCAAACTG GCCGCGCGAA TCCGCCACAA ATACCGTCTG AAAAATACCA CCGGCCTGTC GCTCAACGCC CTGGTGGATT TCGATGAGCC TGTGGATATC TTGAGCCACT TGCTGGTCGG TTCCGAAGGT ACACTCGGCT TCATCAGCGC GGTGACCTAC GACACGGTGA TCGACCACCC GAACAAGGCT TCGGCGCTGA TCGTTTTCCC GGATGTGGAA ACCTGCTGCA ACGCCGTCAC CGTGCTGAAA AGCCAACCGG TGTCGGCCGT GGAACTGCTC GACCGCCGCA GCCTGCGCTC GGTGCAGGAC AAACCCGGCA TGCCGGCTTT CGTACAGCAG CTGTCGAACA ATGCCTGCGC GCTGTTGATC GAATCCCGCG CCGCCTCTTC CACTTTGCTG CAGGAACAAC TGGCGCAGAT CATGGCGTCG CTCAGCGCCT TTCCGGTGGA AAAGCAGGTC GATTTCACCG AAGACCCGGT CGAAAACGCC CGCCTCTGGG CGATCCGCAA AGACACCTTC CCTGCCGTCG GCGCCGTGCG CAAGACCGGC ACCACGGTGA TCATCGAAGA CGTGACCTTC CCGGTGGAGC AACTGGCGAT CGGTGTGAAC CGTCTGATCG AGCTGTTCGA CAAACACTCC TACGACGAAG CGATCCTTTT CGGACACGCA CTGGAAGGCA ATCTGCACTT CGTCTTCACC CAAGGCTTCA ACAGCCCAGA AGAAGTCGCA CGCTATCAGG CGTTCATGGA CGACGTGGCG CAACTGGTGG CCGTGGAGTT CGGCGGTTCG CTGAAGGCGG AACACGGCAC CGGACGCAAC ATGGCGCCCT TCGTCGAACT GGAATGGGGC AGCGACGCCT ATCAATTGAT GTGGCAGCTC AAGCGCCTGC TCGACCCCAA CGGCATTCTC AATCCGGACG TGGTACTCAG CGAAGATCCG CAGATCCACC TCAAGCACCT GAAACCGCTG CCGGCGGCCG ACGAGATTGT GGATAAATGC ATCGAGTGCG GTTTCTGCGA GCCGGTCTGC CCCTCGAAAG GCCTGACCCT GAGCCCGCGC CAGCGCATCG TGATCTGGCG CGATATCCAG GCGCGAAAGC GCGCCGGGAT CGACACCACC GAACTGGAAA AAGCCTACGA ATACCAAGGC ATCGATACCT GCGCCGCGAC CGGGTTGTGT GCGCAACGCT GCCCTGTGGG AATCAATACC GGTGAGCTGG TGAAAAAGCT GCGCAGCCGT CACGCAACCC ATACGAAAAC CGCCAACCTG ATCGAAGGAA ATTTCGCCAC CACCCTGCAA GGTGCGCGTT TCACCCTGCA TGTGGCCAAC GGAGCGCGGA TGTTGATGGG TGCACCGCGC CTGGCGAAGC TTTCAGCGAC CCTGACGCGG CTGTCCAAGG GTCAGGTGCC GCTGTGGACC AACGCGATGC CGCAACCGGA AAAAGCCATT CGCTTCAGCC CGGCCGTGAC GGACGAACGC CCGCGCGTTG TGTATCTGGC GGCCTGCGTC TCGCGAGTGA TGGGGCCGGC GGCGGGCGAC AAGGAGCAGA CGTCGCTGTA CGACAAAACC CGTGGTCTGC TGGAAAAGGC CGGTTATCAG GTGGTGTTCC CGGACAATCT GGACAACCTC TGCTGCGGTC AGCCCTTCGC GTCCAAAGGC TATGCCGAAC AGGCCGAACA CAAGCGTCAG GAACTGATCG GCGCATTGCT CCAGGCCAGT CGCGGCGGGC TCGATCCGAT CTATTGCGAC ACCAGCCCCT GCACGTTGCG GCTAGTGCAG GATGTGGGAA ATGTTCGCCT GGATCTGTAT GACCCTGTGC GATTCATCCG TACGCATCTG ATGGATCGGC TCGAGTTCAC GCCGCAGGAA GCACCGATTG CCGTTCACGT GACCTGCAGC ACTCAGCATC TTGGGGAAAG CCAGGCGCTG ATCGACCTGG CGCGCCAATG CAGCAAGACG GTTGTGATTC CGGAAGGTAT TCACTGCTGC GGTTTCGCCG GCGACAAGGG TTTCACCACG CCGGAGCTCA ACAGCCACTC ACTGCGAACG CTCAAGGATG CGGTGCAACA ATGCAGCGAG GGGATTTCCA CCAGCCGCAC CTGTGAGATC GGTCTGACGC AACATGGTGG AATCGACTAC CACGGTCTGG TGTATCTGGT GGATCGGGTG ACCCAAGCCA AAGCCCCCGC AACCGCCCTC TGA
|
Protein sequence | MTLPATFLRD AQQLIPAERR FDDPLSTLAF GTDASFYRLI PQLVIRVESE DEVVALLKLA QRDQVPVTFR AAGTSLSGQA ISDSVLIVLG DNWNAREIRG QGTQIRLQPG VIGAQANAWL APFGRKIGPD PASINACKIG GIVANNASGM CCGTAQNTYH TLAGIRLVLA DGTRLDTEDA ASVAAFRVSH GDLLERLATL GRETRANAKL AARIRHKYRL KNTTGLSLNA LVDFDEPVDI LSHLLVGSEG TLGFISAVTY DTVIDHPNKA SALIVFPDVE TCCNAVTVLK SQPVSAVELL DRRSLRSVQD KPGMPAFVQQ LSNNACALLI ESRAASSTLL QEQLAQIMAS LSAFPVEKQV DFTEDPVENA RLWAIRKDTF PAVGAVRKTG TTVIIEDVTF PVEQLAIGVN RLIELFDKHS YDEAILFGHA LEGNLHFVFT QGFNSPEEVA RYQAFMDDVA QLVAVEFGGS LKAEHGTGRN MAPFVELEWG SDAYQLMWQL KRLLDPNGIL NPDVVLSEDP QIHLKHLKPL PAADEIVDKC IECGFCEPVC PSKGLTLSPR QRIVIWRDIQ ARKRAGIDTT ELEKAYEYQG IDTCAATGLC AQRCPVGINT GELVKKLRSR HATHTKTANL IEGNFATTLQ GARFTLHVAN GARMLMGAPR LAKLSATLTR LSKGQVPLWT NAMPQPEKAI RFSPAVTDER PRVVYLAACV SRVMGPAAGD KEQTSLYDKT RGLLEKAGYQ VVFPDNLDNL CCGQPFASKG YAEQAEHKRQ ELIGALLQAS RGGLDPIYCD TSPCTLRLVQ DVGNVRLDLY DPVRFIRTHL MDRLEFTPQE APIAVHVTCS TQHLGESQAL IDLARQCSKT VVIPEGIHCC GFAGDKGFTT PELNSHSLRT LKDAVQQCSE GISTSRTCEI GLTQHGGIDY HGLVYLVDRV TQAKAPATAL
|
| |