Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0740 |
Symbol | |
ID | 3715044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 867938 |
End bp | 869920 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346472 |
Protein GI | 77456967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.324626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.305327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGT TATCCATCAA TCAGATATCG ATTGAGAACC TAGGTCCGTT TCGTGAGCGG CAAAACTTTG ACCTAAGTGT CATGCCTGGC CGACCTGTCA TTTTGCTTAA AGCATTAAAT GGCAGTGGAA AAACTACGTT GCTTACAGCG CTCCAAATAG GACTGTATGG CTATAAAGCG ATCAACATAG CGCGCCGTAC CGAGTACGAG CAGCTAATAG CTGGATTGCA GCGGACAGAT GCTACTGGGC CAGCTCGAAT CGAGATGCAT CTGAGTGTTG AAGTGGGGCA CTATATTCAA GAGCTGACCT TACGTCGAGA GTGGCATCCA AAGGAAAAGG GATTCGGAGA GCAGTTCCGC GTGTTTGCAG GGCACATGGA AGATTTGGCT CTTGCGGAAG ACTGGGATGA ATTCATTAAT GGAATTCTGC CGGTAGAGTT AGTGCATCTA TTCTTTTTCG ATGGTGAAAA GATTGAAGCG TTGGCTAATC CGGAGCGTTT GCCTGCGCTT CTGCGCCGGG CTACTGAGGT CTTCCTTGGC TTAGGTGGTA TTGACGCCTT GGCAGGAGAT CTCAAAGCGG TCGAGCGGCG TGCCAATAAG AAAGTGTTGC CCACCGATTG CGCCGGCAAC CATAGCCAGA CATCTGAATA TGAGTTAGAG CTCAAACAGC TTGAACAACG TATTGAAATG CTCTCACAGC GACAAGCACA CGCTAGGACA AACCTCGACG AAGCACAGCG TAAGCTCGAA AGCTTTTCAA TCGAAGCGCA GAGAAGCGGT TTGGATGCCT ACCAACAGGC AGCACAGCTA CGCGTCCGCC TAGCGCTGTG TGAGCAGGAA TACGGACGAG CACGCGCTTT GTTAGTAACT GCACTTGAAG ACCCGATTTT ACCTTTGACC TGGCTCGGGC CGCTTTGGGA ATCCTATAAA GCATATTGGC AGAAGGATCA CCAGTCGAAG CACAACGATC TGATCGTCGA AGAGTTCGCA AAGCGGGACC AGCGTATTCT TGAGCGGCTT GCGCTCGATG CGCCGCATGT TATATCGATA GCTGCTGAGC TATTCGCCGC TGACCTAAAA GGCTTGCGAG TCGACAAGTC TCATATTCCG ATACTGCTTT CGGGAGGGGA TCCTACTGAA ATTGAGGCGC AGTTCCAGCA AGCTAAGCGG CGTCTAAGAG ACGCAAAGGA AATCGTTGCC ACAGCTCAAC GAACAATGGA AAAAGCTCAA GATGCGGTGC ATCAGATTCC TGCACATGAG CAGCTTAGTA CCGTATTCGA GGCAATGCAG CAGCACACGC GAGGTGTGTC GGCAGCAGAA TTGCAGCTGC ATGAGTTGAG CCGTGAGCTG GAAGAGGCGC GCAATAAACA GGCTCATTTC GAGCTTCGGT ACCAAGCAGC ATCGGCGCGG GCAAGGGCGG AGCTAAAAGA GAATGCGTTC CATCTTAAAG CTTTGGAGGC CGCTGACCGG GCAAAAGTTG TCTTAGGCCT GTTCCGCGAG AGGTTGCTGG CATCTAAGGC TCAGTGGTTA TCTGAGATGA TTACCACAGA ATTTAAACAG CTATTGCGAA AGCGAAATCT TATTTCTCGA GTATTGGTAG AGGCAGAGAC CTATGCCGTT TCCATCGAAG ATGTTAATGG ATATACATTA CCCATGGAGC GCCTATCGGC AGGGGAAAGG CAAATTTTGG CTATTGCTGT GCTTAGCGCG TTGATTCGGG AGCGCAAGGG GCGGTTCCCT GTGATAGTCG ATACGCCTTT AGCTCGGCTG GATCGCAGTC ATCGCGAAGC ATTGGTTCAC AATTTTTTTG CCAAGATATC GCATCAGGTA ATGGTTCTCT CTACAGACGA AGAGGTCGAG GGTACTGTAC ATATGGCACT TGAACAACAT ATGAGTCGTG AGTATTCATT GATGTTCGAT GATGAAAGTC GCCGTAGCGT CGTTAGTATA AATACTCAAC AGTTCCAGTT AGATACCCTA TGA
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Protein sequence | MAKLSINQIS IENLGPFRER QNFDLSVMPG RPVILLKALN GSGKTTLLTA LQIGLYGYKA INIARRTEYE QLIAGLQRTD ATGPARIEMH LSVEVGHYIQ ELTLRREWHP KEKGFGEQFR VFAGHMEDLA LAEDWDEFIN GILPVELVHL FFFDGEKIEA LANPERLPAL LRRATEVFLG LGGIDALAGD LKAVERRANK KVLPTDCAGN HSQTSEYELE LKQLEQRIEM LSQRQAHART NLDEAQRKLE SFSIEAQRSG LDAYQQAAQL RVRLALCEQE YGRARALLVT ALEDPILPLT WLGPLWESYK AYWQKDHQSK HNDLIVEEFA KRDQRILERL ALDAPHVISI AAELFAADLK GLRVDKSHIP ILLSGGDPTE IEAQFQQAKR RLRDAKEIVA TAQRTMEKAQ DAVHQIPAHE QLSTVFEAMQ QHTRGVSAAE LQLHELSREL EEARNKQAHF ELRYQAASAR ARAELKENAF HLKALEAADR AKVVLGLFRE RLLASKAQWL SEMITTEFKQ LLRKRNLISR VLVEAETYAV SIEDVNGYTL PMERLSAGER QILAIAVLSA LIRERKGRFP VIVDTPLARL DRSHREALVH NFFAKISHQV MVLSTDEEVE GTVHMALEQH MSREYSLMFD DESRRSVVSI NTQQFQLDTL
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