Gene Pfl01_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0740 
Symbol 
ID3715044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp867938 
End bp869920 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346472 
Protein GI77456967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.324626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.305327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGT TATCCATCAA TCAGATATCG ATTGAGAACC TAGGTCCGTT TCGTGAGCGG 
CAAAACTTTG ACCTAAGTGT CATGCCTGGC CGACCTGTCA TTTTGCTTAA AGCATTAAAT
GGCAGTGGAA AAACTACGTT GCTTACAGCG CTCCAAATAG GACTGTATGG CTATAAAGCG
ATCAACATAG CGCGCCGTAC CGAGTACGAG CAGCTAATAG CTGGATTGCA GCGGACAGAT
GCTACTGGGC CAGCTCGAAT CGAGATGCAT CTGAGTGTTG AAGTGGGGCA CTATATTCAA
GAGCTGACCT TACGTCGAGA GTGGCATCCA AAGGAAAAGG GATTCGGAGA GCAGTTCCGC
GTGTTTGCAG GGCACATGGA AGATTTGGCT CTTGCGGAAG ACTGGGATGA ATTCATTAAT
GGAATTCTGC CGGTAGAGTT AGTGCATCTA TTCTTTTTCG ATGGTGAAAA GATTGAAGCG
TTGGCTAATC CGGAGCGTTT GCCTGCGCTT CTGCGCCGGG CTACTGAGGT CTTCCTTGGC
TTAGGTGGTA TTGACGCCTT GGCAGGAGAT CTCAAAGCGG TCGAGCGGCG TGCCAATAAG
AAAGTGTTGC CCACCGATTG CGCCGGCAAC CATAGCCAGA CATCTGAATA TGAGTTAGAG
CTCAAACAGC TTGAACAACG TATTGAAATG CTCTCACAGC GACAAGCACA CGCTAGGACA
AACCTCGACG AAGCACAGCG TAAGCTCGAA AGCTTTTCAA TCGAAGCGCA GAGAAGCGGT
TTGGATGCCT ACCAACAGGC AGCACAGCTA CGCGTCCGCC TAGCGCTGTG TGAGCAGGAA
TACGGACGAG CACGCGCTTT GTTAGTAACT GCACTTGAAG ACCCGATTTT ACCTTTGACC
TGGCTCGGGC CGCTTTGGGA ATCCTATAAA GCATATTGGC AGAAGGATCA CCAGTCGAAG
CACAACGATC TGATCGTCGA AGAGTTCGCA AAGCGGGACC AGCGTATTCT TGAGCGGCTT
GCGCTCGATG CGCCGCATGT TATATCGATA GCTGCTGAGC TATTCGCCGC TGACCTAAAA
GGCTTGCGAG TCGACAAGTC TCATATTCCG ATACTGCTTT CGGGAGGGGA TCCTACTGAA
ATTGAGGCGC AGTTCCAGCA AGCTAAGCGG CGTCTAAGAG ACGCAAAGGA AATCGTTGCC
ACAGCTCAAC GAACAATGGA AAAAGCTCAA GATGCGGTGC ATCAGATTCC TGCACATGAG
CAGCTTAGTA CCGTATTCGA GGCAATGCAG CAGCACACGC GAGGTGTGTC GGCAGCAGAA
TTGCAGCTGC ATGAGTTGAG CCGTGAGCTG GAAGAGGCGC GCAATAAACA GGCTCATTTC
GAGCTTCGGT ACCAAGCAGC ATCGGCGCGG GCAAGGGCGG AGCTAAAAGA GAATGCGTTC
CATCTTAAAG CTTTGGAGGC CGCTGACCGG GCAAAAGTTG TCTTAGGCCT GTTCCGCGAG
AGGTTGCTGG CATCTAAGGC TCAGTGGTTA TCTGAGATGA TTACCACAGA ATTTAAACAG
CTATTGCGAA AGCGAAATCT TATTTCTCGA GTATTGGTAG AGGCAGAGAC CTATGCCGTT
TCCATCGAAG ATGTTAATGG ATATACATTA CCCATGGAGC GCCTATCGGC AGGGGAAAGG
CAAATTTTGG CTATTGCTGT GCTTAGCGCG TTGATTCGGG AGCGCAAGGG GCGGTTCCCT
GTGATAGTCG ATACGCCTTT AGCTCGGCTG GATCGCAGTC ATCGCGAAGC ATTGGTTCAC
AATTTTTTTG CCAAGATATC GCATCAGGTA ATGGTTCTCT CTACAGACGA AGAGGTCGAG
GGTACTGTAC ATATGGCACT TGAACAACAT ATGAGTCGTG AGTATTCATT GATGTTCGAT
GATGAAAGTC GCCGTAGCGT CGTTAGTATA AATACTCAAC AGTTCCAGTT AGATACCCTA
TGA
 
Protein sequence
MAKLSINQIS IENLGPFRER QNFDLSVMPG RPVILLKALN GSGKTTLLTA LQIGLYGYKA 
INIARRTEYE QLIAGLQRTD ATGPARIEMH LSVEVGHYIQ ELTLRREWHP KEKGFGEQFR
VFAGHMEDLA LAEDWDEFIN GILPVELVHL FFFDGEKIEA LANPERLPAL LRRATEVFLG
LGGIDALAGD LKAVERRANK KVLPTDCAGN HSQTSEYELE LKQLEQRIEM LSQRQAHART
NLDEAQRKLE SFSIEAQRSG LDAYQQAAQL RVRLALCEQE YGRARALLVT ALEDPILPLT
WLGPLWESYK AYWQKDHQSK HNDLIVEEFA KRDQRILERL ALDAPHVISI AAELFAADLK
GLRVDKSHIP ILLSGGDPTE IEAQFQQAKR RLRDAKEIVA TAQRTMEKAQ DAVHQIPAHE
QLSTVFEAMQ QHTRGVSAAE LQLHELSREL EEARNKQAHF ELRYQAASAR ARAELKENAF
HLKALEAADR AKVVLGLFRE RLLASKAQWL SEMITTEFKQ LLRKRNLISR VLVEAETYAV
SIEDVNGYTL PMERLSAGER QILAIAVLSA LIRERKGRFP VIVDTPLARL DRSHREALVH
NFFAKISHQV MVLSTDEEVE GTVHMALEQH MSREYSLMFD DESRRSVVSI NTQQFQLDTL