Gene Pfl01_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0725 
Symbol 
ID3714739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp852943 
End bp853971 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content61% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_346458 
Protein GI77456953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCGC TCGGCTTCAC CTCCGTCCCA CCGCTGCTCA AATACCTGCG CCATGCCGAA 
CATCTGGGCC TGGCCATCGA GCCTGCGTTG GCGGCGGCCG GGTTGCAGGC GCAGCAGTTG
AGCGACAACA GTCTGCGCTT GCCGGGGGAA ACCCATGAGC GGTTGCTCGA TTACTTTTGC
GAACACTCGG GCGATCCGCT GTTCGGCCTC AACGCGGCGA ATTTCGTCCT GCCCAACTCG
TGGAGCGTGT TGGGTTACAT CACCATGAAT TGCGCGACAT TGGGCGATGC CATGAGCCGC
ATCATGCCGT TCGAAAAACT GGTGGGCGAC ATGGGTGTCA GCCGCGCCGA GGTACACGAC
AGCCATGTGC ACCTGATCTG GAGCTGCCGC TTTGAGCGCC CGCAGATTCG CCGGCATCTG
GTGGAAAACG TGCTTGGCTC ATGGCTGCAA TACGCACGCT GGATCGCCGA TACCCGACTG
TCGCCGGCCG CTGTGTGGCT GGAACACTCG ATCCCGGCGG ACACGACGCT GGCGCAGTAC
GAACAGTTTT TCGAATGCCC GGTGCTGTTC GATCAGCCGT ATTCTGCGCT GGTCGTGCCG
TTGCCGTATT TGCAGTTGCC GTTGCGCCAG GCCGATGCAC ATTTGCTGCG CACCCTGGAA
GAACACGCAC AAAGTCTGAT GGCGACACTG GAGGATGCGT CGCTGGAGCA GCGGGTCAAA
AGCATCCTGC GCCAGTTGCT CAAGGAAGGC CTGCCGCGCA AGGAACAAGT GGCCGAACAT
CTCGCCGTGT CGGTACGCAC GCTGCAACGC CAGTTGCATC AGGCCGGCAC GTCATATCAG
CAGATTCTCG ACGAACTGCG CCAGGAACTG GCCGAGCATT ACCTGCTCAA CAGCACCCTG
CCGATTCAGG ACATCGCCCA GTATCTGGGC TTCAGCGAAT CACGCTCCTT TCACCGCGCC
TTCAAGAGCC GACGCGGCAT GCCGCCCGGT GAGTTTCGGC AGACTCACCG GGTCTCGAAC
GACGGCTAA
 
Protein sequence
MQSLGFTSVP PLLKYLRHAE HLGLAIEPAL AAAGLQAQQL SDNSLRLPGE THERLLDYFC 
EHSGDPLFGL NAANFVLPNS WSVLGYITMN CATLGDAMSR IMPFEKLVGD MGVSRAEVHD
SHVHLIWSCR FERPQIRRHL VENVLGSWLQ YARWIADTRL SPAAVWLEHS IPADTTLAQY
EQFFECPVLF DQPYSALVVP LPYLQLPLRQ ADAHLLRTLE EHAQSLMATL EDASLEQRVK
SILRQLLKEG LPRKEQVAEH LAVSVRTLQR QLHQAGTSYQ QILDELRQEL AEHYLLNSTL
PIQDIAQYLG FSESRSFHRA FKSRRGMPPG EFRQTHRVSN DG