Gene Pfl01_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0721 
Symbol 
ID3714735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp848776 
End bp850125 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID 
Productgluconate transporter 
Protein accessionYP_346454 
Protein GI77456949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.835721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGT CCTTCGGCTA TTGGCTGCTG GTGTACGCCG CCGTTGCCAT CATCGCCCTG 
ATCGTTCTGA TCGCCCGTTA CCGGCTCAAT CCGTTCATTG TCATCACCCT GATTTCCATC
GGCCTGGCGC TGGTGGCGGG GATGCCGCCG TCCGGCGTGG TGGGGGCTTA CGAGGCCGGG
GTGGGCAAGA CGCTGGGGCA CATTGCGCTG GTGGTGGCGC TGGGGACGAT GCTCGGCAAG
ATGATGGCCG AGTCCGGTGG CGCCGAGCAG ATGGCGCGCA CGTTGATCGA GCGTTTTGGC
GAGAAGAACG CGCACTGGGC GATGGTGTGC ATTGCGTTTC TGGTGGGACT GCCGCTGTTT
TTCGAAGTCG GCTTCGTGTT GCTGGTGCCG ATTGCCTTTA CCGTGGCGCG GCGGGTGGGC
GTGTCGATCC TGATGGTCGG TTTGCCGATG GTCGCGGGTC TGTCGGTGGT GCATGCGCTG
GTGCCGCCTC ATCCGGCGGC GATGCTGGCG GTGCAGGCTT ATCAGGCGTC GGTCGGGCAG
ACCTTGCTGT ATGCGATTGC CATCGGCATT CCGACGGCGA TCATTGCCGG CCCCCTGTAC
GCCAAATTCA TCGTGCCGCG CATTCAGTTG CCGGCGGATA ACCCGCTGGA AAAACAATTT
CTCGAACGCG AACCCCGCGA CAGCCTGCCG GGTTTCGGCA TCACCATGGC GACCATTCTG
TTGCCGGTGG TGCTGATGTT GATCGGCGGC TGGGCCAACC TGATTGCCAC GCCGGGCAGC
GCTTTCAATC AGTTCCTGTT GTTCATCGGC AACTCGGTGA TCGCGCTGTT GCTGGCGACG
CTGTTGAGTT TCTGGACCCT CGGCATTGCC CAGGGTTTCA ACCGCGAATC GATCCTCAAA
TTCACCAACG AATGCCTGGC ACCGACCGCC AGCATCACCT TGCTGGTGGG CGCCGGTGGC
GGTCTGAACC GGATTCTGGT GGACGCCGGC GTCACCGATC AGATCGTCGG CCTCGCTCAC
GAATTTCATT TGTCGCCGCT GATCATGGGC TGGCTGTTCG CCGCGTTGAT GCGCATCGCC
ACCGGTTCGG CCACGGTCGC GATGACCACG GCTTCCGGCG TGGTCGCGCC AGTGGCCATC
GGTCTGGGTT ATCCCCACCC GGAACTGCTG GTGCTGGCGA CCGGCGCGGG CTCGGTTATC
TTTTCCCACG TCAACGACGG CGGCTTCTGG TTGATCAAGG AATACTTCAA CATGACCGTG
GCCCAGACGT TCAAGACCTG GACGGTGCTG GAAACCCTGA TCTCGATTGT CGCTTTCGCC
CTGACCGTCG GTCTTTCTTA CCTGCTGTAG
 
Protein sequence
MTPSFGYWLL VYAAVAIIAL IVLIARYRLN PFIVITLISI GLALVAGMPP SGVVGAYEAG 
VGKTLGHIAL VVALGTMLGK MMAESGGAEQ MARTLIERFG EKNAHWAMVC IAFLVGLPLF
FEVGFVLLVP IAFTVARRVG VSILMVGLPM VAGLSVVHAL VPPHPAAMLA VQAYQASVGQ
TLLYAIAIGI PTAIIAGPLY AKFIVPRIQL PADNPLEKQF LEREPRDSLP GFGITMATIL
LPVVLMLIGG WANLIATPGS AFNQFLLFIG NSVIALLLAT LLSFWTLGIA QGFNRESILK
FTNECLAPTA SITLLVGAGG GLNRILVDAG VTDQIVGLAH EFHLSPLIMG WLFAALMRIA
TGSATVAMTT ASGVVAPVAI GLGYPHPELL VLATGAGSVI FSHVNDGGFW LIKEYFNMTV
AQTFKTWTVL ETLISIVAFA LTVGLSYLL