| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0708 |
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| Symbol | |
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| ID | 3714722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 839060 |
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| End bp | 840511 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_346441 |
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| Protein GI | 77456936 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00245457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCGA TTACACGTTT GATGCTGGCG CCGCTGGCGT CGTCCATCCT GTTGGCGGCC
GGTTGTGTGA ACTACGCCGG GATCGATCAT CAGGGCAAAT TGCTGGCGGT CGGCGATGCA
CCGTCCGACA GCCTGAAAGA CAAGCTGCCG CCGGCCCAAT GGCCGCGTGC GGACTGGTGG
ACATCGCTGG GTGATCCACG TCTGGGTGCT CTGATCGAAG AGGCTTATGC CAGCAACCCG
GACTTGCAGG AAGTCGCTGC CCGGGTCGCG AAAGCCAACG CATTTCTCGA CCTGCGCGAC
GCCGAGCGTT ATCCGGAAAT GGACGCGTCG GCGGGTGTCA CTCGCGGTCG GCTGTCGCGC
TTTGAGGACT ACAGCGGCGA GGGCCACCAG TACTTCACTG CGCGTAATCT GGCGGTCAAT
TTCAGCTATA CCTTCGACCT CTGGGGCGGC CAGCGTGCCG CCTGGGAATC GGCGCTCAAC
AGCGCACGAG CGGCGGAAGT CGATCTGCAA TCGTCGCGGC TGATTCTCGC GGTCAACGTG
GTCAAGGCTT ACAACCAGTT GGCCTATGCG TGGCAGGTCT CGGAGCTCAA TCAACGGGAT
CTTGAACGCC TGAGCAAATT GGTGGAGCTG ACGGATTCAC GTTACGGCTC GGGCCTCGAC
AACCTGTCGC AACTCAAGCA GGTGCAGAGC CTCAAGGCGC GTTCGGAATC GACACTGATC
GGCGCTAACG AAGATATCGA AATTGCTCGT CTTCAACTGT CGGCGCTGAT CGGCAAGGGC
GTTGATCGTG CGCACACCCT GGAGCGGCCA TCGAATCTGC AAGCCAGTGT GGTGGCCTTG
CCGGCGCAGT TGCCGGCCCA ATTGTTGGGC CGTCGTCCGG ACATCGTCGC CGCACGTTGG
CGCGTGGAGG CCGAGACTAA AAACGTCGAG GCGGTGAAGA CCACGTTCTA CCCGAACATC
AATCTGGTGG CAGCGGCGGG TTCCCATGCT TTGACCGGCG ATGCGCTGTT CGCCGGGGTC
AGCAAGTTCT GGAATGTGGC GCCGACGGTG TCGCTGCCGA TCTTCGATGC CGGGCGCCTG
CGCTCAGATC TCAAGGCCGG CAATGCCGAA CTCGACAGCG CCATCGCGCA GTACAACCGG
GTGTTGAATT CGGCGCTGCA TGAGGTGGCG ATTTCGGTCA CGCAGCTGCG TTCGTTCGAG
CAGCAGATCG TCGTGCAGCG CGATGCCTGT GCGATTGCCC AGTCGTCCTA CGATCTGTCG
CAGTCGCGCT ACAAGGCCGG GGAGGACACG TTTCTCGATG CGCTTAACAT CGAGCAACAA
TTGATTCAGG ACGAAATGCG TCTGGCTTTC CTCAACAGCA AGCACATCGA CAGTTCGGTT
TCGTTGATGG CAGCGCTGGG CGGCGGGTTC CAGGCGCCTT CGCTGGAGAC CGCGCAGAGC
AGCGATTTGT AG
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| Protein sequence | MHSITRLMLA PLASSILLAA GCVNYAGIDH QGKLLAVGDA PSDSLKDKLP PAQWPRADWW
TSLGDPRLGA LIEEAYASNP DLQEVAARVA KANAFLDLRD AERYPEMDAS AGVTRGRLSR
FEDYSGEGHQ YFTARNLAVN FSYTFDLWGG QRAAWESALN SARAAEVDLQ SSRLILAVNV
VKAYNQLAYA WQVSELNQRD LERLSKLVEL TDSRYGSGLD NLSQLKQVQS LKARSESTLI
GANEDIEIAR LQLSALIGKG VDRAHTLERP SNLQASVVAL PAQLPAQLLG RRPDIVAARW
RVEAETKNVE AVKTTFYPNI NLVAAAGSHA LTGDALFAGV SKFWNVAPTV SLPIFDAGRL
RSDLKAGNAE LDSAIAQYNR VLNSALHEVA ISVTQLRSFE QQIVVQRDAC AIAQSSYDLS
QSRYKAGEDT FLDALNIEQQ LIQDEMRLAF LNSKHIDSSV SLMAALGGGF QAPSLETAQS
SDL
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