Gene Pfl01_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0701 
Symbol 
ID3714460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp829100 
End bp830182 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content61% 
IMG OID 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_346434 
Protein GI77456929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.004629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TAGTGACAGG GGGCGCGGGC TTCATTGGCT CGGCCGTGGT GCGGTTTCTG 
ATTGAAGAGA CCGAATGTGA AGTGATCAAC GTCGACAAAC TGACCTACGC CGGCAATCTC
GAATCTCTGG CTGAGGTGTC CGATTCACCG CGTTACCGGT TCTGTCAGGT CGACATCTGC
GACAGGCCGG CGCTGGACGA ACTGTTCGCA CGGCTGCAAC CGGATGCGGT GATGCATCTG
GCCGCCGAGT CCCATGTGGA CCGTTCGATC GATGGCCCGC AAGCCTTCAT CGAAACCAAC
ATCGTCGGCA CCTACACGCT GCTCGAAGCG GCGCGTGGTT ACTGGAACCG ACTGGACGCG
GCGCGTCAGG CGGCGTTCCG TTTCCATCAC ATTTCCACCG ATGAAGTGTA CGGCGACCTG
GAACCCGAAG ATCCGGCATT TACCGAGCGC ACGCCGTATG CGCCGAGTTC GCCGTACTCG
GCAACCAAGG CCGGTTCCGA TCATCTGGTT CGCGCCTGGC ATCGCACCTT TGGCCTGCCG
GTGGTCATGA GTAACTGCTC GAACAATTAC GGGCCGTATC ACTTCCCGGA AAAACTGATT
CCTCACGTCA TCCTCAATGC GCTGCAAGGC AAGCTGCTGC CGGTGTATGG CGATGGCGCG
CAGATTCGCG ACTGGCTGTT CGTCGAAGAT CACGCCCGCG CACTGTATGC GGTGGTTACG
CGCGGTGAGG TCGGGCAGAC CTACAACATC GGCGGCCACA ACGAGAAGAC CAACCTGGAA
GTGGTGCACA CCCTGTGCGA TCTGCTCGAA GCACGCGGTG CGGAAAAACC GGCGGGCGTC
GCGCACTTCC GCGACCTGAT CACCTTCGTC AAGGATCGTC CGGGCCACGA CAAACGCTAC
GCCGTCGATG CCGGAAAAAT TCACGCGACG CTGGGCTGGA CGCCGCAGGA AACCTTCGAA
AGCGGCATGC AGAAAACCGT CGACTGGTAT CTGGATAACC GCGCCTGGTG GGTGCGGGTG
ATGTCCGGTG CCTACGCGCT GGAGCGCCTC GGCGAGCAAA GCGACAAAGC CCTTGTGGCC
TGA
 
Protein sequence
MKILVTGGAG FIGSAVVRFL IEETECEVIN VDKLTYAGNL ESLAEVSDSP RYRFCQVDIC 
DRPALDELFA RLQPDAVMHL AAESHVDRSI DGPQAFIETN IVGTYTLLEA ARGYWNRLDA
ARQAAFRFHH ISTDEVYGDL EPEDPAFTER TPYAPSSPYS ATKAGSDHLV RAWHRTFGLP
VVMSNCSNNY GPYHFPEKLI PHVILNALQG KLLPVYGDGA QIRDWLFVED HARALYAVVT
RGEVGQTYNI GGHNEKTNLE VVHTLCDLLE ARGAEKPAGV AHFRDLITFV KDRPGHDKRY
AVDAGKIHAT LGWTPQETFE SGMQKTVDWY LDNRAWWVRV MSGAYALERL GEQSDKALVA