| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0696 |
|---|
| Symbol | |
|---|
| ID | 3714455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 822733 |
|---|
| End bp | 823620 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_346429 |
|---|
| Protein GI | 77456924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CATTTATCGG TCTGGGCAAC ATGGGCGCGC CGATGGCGCG CAACCTGATC
AAGGCCGGGC ATTCGCTGAA TCTGGTGGAC CTGAACAAAA CCGTGCTCGC GGAGCTCGAG
CAACTGGGTG GCACCATCCG CGCTTCGGCT CGCGAAGCGG CTGAAGATGC AGAACTGGTG
ATCACTATGC TGCCCGCCGC CGTGCATGTA CGCAGCGTCT GGCTCGGTGA GGACGGTGTG
CTGGCCGGGA TCGGCAAAGG CGTGCCGGCG GTGGATTGCA GCACCATCGA TCCGCAGACG
GCGCGCGATG TGGCGGCGGC GGCCGCCAAG CAAGGCGTGG CCATGGCCGA TGCCCCGGTG
TCCGGTGGTA CCGGCGGCGC CACCGCAGGT ACATTGACCT TCATGGTCGG CACCACTCCT
GAACTGTTCG CCACCCTGCA ACCGGTGCTG GCGCAGATGG GCCGCAACAT CGTGCATTGC
GGTGAGGTCG GCACCGGTCA GATCGCCAAG ATCTGCAACA ACCTGTTGCT CGCCATTTCG
ATGGTCGGCG TCAGCGAGGC GATGGCCCTG GGCGATGCGC TGGGGATCGA CACCACGGTG
CTCGCCGGGA TCATCAACAG CTCGACCGGC CGTTGCTGGA GTTCGGAAAT GTACAACCCG
TGGCCGGGCA TCGTCGAAAC GGCACCGGCC TCGCGCGGCT ACACGGGTGG CTTCGGCGCC
GAACTGATGC TCAAGGATCT GGGGCTGGCC ACCGAGGCGG CGCGTCAGGC CCATCAGCCG
GTGGTGCTGG GCGCGGTGGC GCAGCAGTTG TATCAGGCGA TGAGTCAGCG CGGGGAAGGG
GGCAAGGACT TCTCGGCGAT CATCAACAGC TATCGCAAGC CGCAGTAA
|
|---|
| Protein sequence | MKIAFIGLGN MGAPMARNLI KAGHSLNLVD LNKTVLAELE QLGGTIRASA REAAEDAELV
ITMLPAAVHV RSVWLGEDGV LAGIGKGVPA VDCSTIDPQT ARDVAAAAAK QGVAMADAPV
SGGTGGATAG TLTFMVGTTP ELFATLQPVL AQMGRNIVHC GEVGTGQIAK ICNNLLLAIS
MVGVSEAMAL GDALGIDTTV LAGIINSSTG RCWSSEMYNP WPGIVETAPA SRGYTGGFGA
ELMLKDLGLA TEAARQAHQP VVLGAVAQQL YQAMSQRGEG GKDFSAIINS YRKPQ
|
|---|
| |