Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0688 |
Symbol | |
ID | 3714447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 808400 |
End bp | 811852 |
Gene Length | 3453 bp |
Protein Length | 1150 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_346421 |
Protein GI | 77456916 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.131155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACA CCCAGTCCCT CAACGCTGCA TTCATGGTCG TTCAGAGCAA CAGCCTGGAT GAACTGCGCA GCCTTGTGAT CAGCATCATG CGGCGCTATC CACTGGCACC CCTGGAGAAC GAAATTGCGC TCGTGCAGAG CAACGGCATC GCTCAATGGC TCAAGCTGGC ACTGGCTGAA GACCCTGAAG CGGACGACTC TGGCGGCTGT GGTATCGCCG CCGCTATTGA TGTGCAACTG CCGGGCAGTT TCATGTGGCA GCTTTACCGG ATGGTTCTGG GGCGAGAGGA GATTCCGGCA ACGTCGCTGC TCGATAAGGC ACCATTGACC TGGCGCCTGA TGCGCCTGTT GCCACAGGTC ATCACCCGAC CCCATTTCGA ACCGCTACAA CGCTTCCTCA TCCATGACAC CGATCTGCGC AAGCGTTACC AGTTGTCCGA ACGTCTGGCA GACCTCTTTG ACCAATATCA GGTTTACCGC GCTGATTGGC TTGAGGATTG GGCAGAGGGG CATCATCAAC TACGCAATGT GAGGGGTGAA GCGAAGCCGC TTCCTCCGAC CAGTTGCTGG CAGGCAGAGT TGTGGCGTGC CCTGCTGGAC GATGTGGGCG AGCAAGGCAT GGCTCAAAGT CGGGCGGGCG TGCACCAGCG GTTCATGGAG CGCATCAACA GTCTTGAACG CGCACCGACC GGACTTCCCC AGCGAGTGAT CGTTTTCGGA ATTTCCTCGT TGCCAGCCCA GGTACTGGAG GCATTGGCCG GGCTTTCCCG TTTCAGCCAG GTTTTGTTGT GCGTCCATAA CCCCTGTCGT TATCACTGGG CCGATATCGT TGCCGACAAG GATCTCTTGC GCCATCAGTA CAAGCGGCAA GCCCGAAAAA ACGGTATGCC CGTAGTGCTG GATTCGGAAA TGCTCCACCA GCATGCTCAC CCGCTCCTCG CTGCGTGGGG CAAGCAAGGT CGCGATTACA TCAACCTTCT CGACAGCTAT GACGACCCCG ATAGCTATCG CGCAGCATTT CGCAATGGAC GTATCGATCT GTTCAGCGAA AACCAGCCGA AGAACATGCT CAATCAGTTA CAGGACGACA TTCTGGAACT GCGGCCGCTC AACGAGACTC GAGCACTCTG GCCGGCAGTC GATCTGACTC AAGACGATTC GATCCGCTTT CATATTGCCC ATAGCGCCCA GCGCGAAGTG GAGATTCTCC ACGACCAGTT GCTGGCACGT TTCAGTGCCA ACCCTCAATT ACGCCCGCGC GACGTGATCG TGATGGTGCC TGACATCGAT AGTTATGCGC CGCATATTCG CGCCGTATTT GGGCAGCTGG ATCGTCATGA TCCACGCTTC ATTCCCTTCA CGATGGCCGA TCAGGGGCAG CGCGGACGGG ATCCATTACT GATCGCTGTC GAGCATCTGC TCAAGCTGCC GGATAGTCGT TTCCCCGTCA GTGAAATCCT CGACTTGCTT GATGTTCCGG CGTTACGCGC CAGATTTGGT GTGCAGGAAC GAGACTTGCC GACCCTGCAT CGCTGGATCG AAGGTGCCGG CGTGCGTTGG GGGATTGATG CCGGGCAACG GGCCGAACTG GGATTGCCCG ACGAACTGGA GCAAAACAGT TGGCGCTTCG GCCTGCGTCG GATGCTGCTC GGCTATGCCG TCGGCAGTTC CGGAGCCTGT GGGGATATCG AACCCTACGA TGAAATCGGC GGTCTCGATG CCGCGTTGAT TGGGCCATTG GTAGCGTTGC TGGATGCACT GGAGCTTTCG CATCAGCAAC TGATGAAACC CGCCCAACCA CAGGAATGGG GGCATCGGCT TCAGGCGTTG ATGCAACTGT TTTTCAAGCC CGAAGATGAG CATGACGACT ACCTGCTGGC TCAACTCGAG GAGTTGCGCG AAACCTGGAT GGAAACCTGT GAGGCCGTCG GTCTGTTGGA CGAGCTGCCA CTGACCGTCG TCCGTGAGGC TTGGCTGGCG GGGCTGGATC AGGGGCGTCT GTCGCAGCGC TTCCTGGCCG GAGCCGTTAA CTTTTGCACG CTGATGCCGA TGCGCGCGAT CCCGTTCAAG CTGGTTTGCC TGTTGGGCAT GAACGATGGC GATTATCCGC GCGCTCAACC GCCGCTGGAC TTCGATCTCA TGGGCAGCGA CTACCGGCCG GGAGATCGCT CCCGTCGGGA GGATGATCGC TATCTTCTGC TCGAAGCGCT CTTGTCCGCC CGTCATCAGC TCTACATCAG TTGGGTCGGT CGCAGCATTC GCGACAACAG CGAGCGGCCA GCCTCTGTGT TGATCGGCCA GTTGCGCGAT CATCTCGCCA ATGGATGGCG ATCGAGCGAC AACAAAGAGG ATCTCCTGAT TGCCATGACT CAGGAGCATC CGTTGCAGCC ATTCAGTTCG CGCTACTTCC ATGAGGAAGA CAAACTGTTC AGCTATGCCA GCGAATGGCA GGTGCTGCAT CAACCTCACG AACAGAACGA CACCGCAACG ATGCTTGTAC CCCATATCCA GGAGGAGCCG TTGAGTCTGG AACTGCTACA GGACTTCCTG CGCAATCCGG TCCGACACTT TTTCACTCAG CGACTCAAGG TTTACTTCGA AGCGGCGCAG ATACCTCAGG CTGACGAGGA ACCCTTTGTA CTGGATGCGT TGCAGCGATA TATGCTCAGT GACAGCTTGC TCGGAGCAGC CTTGAGACAC CCGGATAATG TTGATCAGGC ACTCGAGTCT CAAGCCCGAC GCCTGCAGAA CAGCGGCCTG TTGCCCATTG CCGGATTCGG TGAATGCCTT CAGCGAGAGC TGATCGAGCC TTTGCCAGAC TTGTTGCAGC GATATCAACA GTTGCTGGCG TTATGGCCGA CACCCCTGTC CAACGCCCTA CCGATCAATT TTGAATGGCA GGAGCTGCGC CTTGAAGGGT GGCTGGGCGG CTTGCACCGG CGCGCCGATG GCGGCGTACT GTCGGTCACG ACGATCCCGA ACAGCATAGG CTCGATCAAG AGCCGCAAAT GGCATCGCCT GACCAAGCCC TGGGTCAGCC ACCTTGTCGC GTGTGCCAGT GGGCTCTCCC TGACGACCGC ACTGGTGGCC AGTGATGACA CGCTCCTTCT TGAACCTCTG GAACAGACTC GAGCGGGACG GGTTCTTGAG GATCTGCTGC TCGCCTGGCA GACGGGTATG CGTCAGCCAC TTCCGGTCGC GGTAAAAACG GCTTTTGCAT GGCTGGGGCA GACCGATCCA GTCAAGGCTG AAGCGGCTGC CCGCAAAACC TATGAGGGTG ATGGTCAGAC CAGCGAAGGC GAACGTCGGG AAAGCCCGGC TCTGGCCCGA CAGTTCCCCG ACTACGATGC ACTGCAGGCG GATGAAACCT TCTCCGGTTG GTGTGATGCG CTTTATCGCC CGTTGCTCGA GGCACCTTGG CACTCATGGA CCCACGAGGA GGCAGGCGCA TGA
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Protein sequence | MPDTQSLNAA FMVVQSNSLD ELRSLVISIM RRYPLAPLEN EIALVQSNGI AQWLKLALAE DPEADDSGGC GIAAAIDVQL PGSFMWQLYR MVLGREEIPA TSLLDKAPLT WRLMRLLPQV ITRPHFEPLQ RFLIHDTDLR KRYQLSERLA DLFDQYQVYR ADWLEDWAEG HHQLRNVRGE AKPLPPTSCW QAELWRALLD DVGEQGMAQS RAGVHQRFME RINSLERAPT GLPQRVIVFG ISSLPAQVLE ALAGLSRFSQ VLLCVHNPCR YHWADIVADK DLLRHQYKRQ ARKNGMPVVL DSEMLHQHAH PLLAAWGKQG RDYINLLDSY DDPDSYRAAF RNGRIDLFSE NQPKNMLNQL QDDILELRPL NETRALWPAV DLTQDDSIRF HIAHSAQREV EILHDQLLAR FSANPQLRPR DVIVMVPDID SYAPHIRAVF GQLDRHDPRF IPFTMADQGQ RGRDPLLIAV EHLLKLPDSR FPVSEILDLL DVPALRARFG VQERDLPTLH RWIEGAGVRW GIDAGQRAEL GLPDELEQNS WRFGLRRMLL GYAVGSSGAC GDIEPYDEIG GLDAALIGPL VALLDALELS HQQLMKPAQP QEWGHRLQAL MQLFFKPEDE HDDYLLAQLE ELRETWMETC EAVGLLDELP LTVVREAWLA GLDQGRLSQR FLAGAVNFCT LMPMRAIPFK LVCLLGMNDG DYPRAQPPLD FDLMGSDYRP GDRSRREDDR YLLLEALLSA RHQLYISWVG RSIRDNSERP ASVLIGQLRD HLANGWRSSD NKEDLLIAMT QEHPLQPFSS RYFHEEDKLF SYASEWQVLH QPHEQNDTAT MLVPHIQEEP LSLELLQDFL RNPVRHFFTQ RLKVYFEAAQ IPQADEEPFV LDALQRYMLS DSLLGAALRH PDNVDQALES QARRLQNSGL LPIAGFGECL QRELIEPLPD LLQRYQQLLA LWPTPLSNAL PINFEWQELR LEGWLGGLHR RADGGVLSVT TIPNSIGSIK SRKWHRLTKP WVSHLVACAS GLSLTTALVA SDDTLLLEPL EQTRAGRVLE DLLLAWQTGM RQPLPVAVKT AFAWLGQTDP VKAEAAARKT YEGDGQTSEG ERRESPALAR QFPDYDALQA DETFSGWCDA LYRPLLEAPW HSWTHEEAGA
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