Gene Pfl01_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0670 
Symbol 
ID3713955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp783828 
End bp785207 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content62% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_346403 
Protein GI77456898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.753041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGG GAAACTTCAG CGCGGCAGAT CGACTGGAGC GCCTGCCAGT CAGCGGTTAT 
CACCGGATCA TCTTCATCAT CATCGCCCTG GCGTTTTTCT TCGACTCCAT GGATCTGGCG
ATGATGACTT TCCTGCTCGG CTCGATCAAA GCCGAGTTCG GCCTGAGCAG TGCGCAGGCC
GGCCTGCTGG CCAGTTCGAG TTTTTTCGGC ATGGTGCTGG GGGCGTCGCT GTCCGGTCTG
TTGGCTGATC GGTTCGGTCG CAAACCGGTG TTCCAGTGGA GCATCGTCCT GTGGGGGCTG
GCCAGTTACC TGTGTTCCAC GGCGCAGACG GTCGAGAGCC TGACGCTGTT TCGCATTCTG
CTGGGAATCG GCATGGGCAT GGAGTTTCCG ATTGCCCAGT CGATGCTGTC GGAGTTGATC
CCCGCCCAGC GTCGGGGTCG TTATATCGCG TTGATGGACG GTTTCTGGCC GCTGGGTTTT
GTGGCTGCCG GGGTGCTGTC GTATTTCCTG CTGCCATTGA TTGGCTGGCG CGACATCTTT
CTGGTGCTGG CGGTGCCGGC GGTGTTCGTC CTGGCGATCC GCTTTTTCAT TCCCGAGTCG
CCGCGCTGGC TGGAACAGGC CGGCAAGCAT GACGAGGCGG ACAAGGTTTT ACGCGGCATC
GAGGCGCGGG TACAGGCCTC ACTCGGTGGT GCCGCATTGC CGGAGCCGGT TCGCCTGCCG
CGAAGCGTGA CACCTCCGGG CCATTTCCTT TCGGCGCTCA AACAGATCTG GTCGCCGCTG
TATCGCCAGC GCACGACGAT GATCTGGAGC CTGTGGTTCT TCGCGTTGCT CGGTTTTTAC
GGCCTGACCT CGTGGCTCAG CGCGTTGCTG CAACAATCGG GTTTTGCCGT GACTCAGTCG
GTGTATTACA CCGTGCTGAT TTCCCTCGGC GGGATTCCCG GCTTCCTGAT GGCGGCCTGG
CTGGTGGAGC GTTGGGGCCG CAAGCCGGTG TGCATCGTCA CGTTGCTCGG CGGTGGGGTG
ATGGCGTTTC TGTACGGACA AAGCGCCGTG TTTGGCGGTA ACGTGGCGCT GCTGATCGGT
ACGGGGCTGT TGATGCAGTT TTTCCTGTTC GGCATGTGGG CGGTGCTCTA CACCTACACG
CCGGAGCTGT ATCCGACCTC GGCGCGGGCG ACGGGCTCGG GGTTCGCCTC GGCCATTGGA
CGCGTAGGTT CTCTGCTCGG GCCATTGGTC ACCGGGCTGG TGTTCCCGAT CACCGGGCAG
GGCGGAGTGT TTGCGCTGGG AGCGTTGTGC TTTACGATTG CGGCGGGGGT GGTGTGGCTG
TTCGGGATGG AGACCCGGGG CAAGACGCTG GAAGAGTTGA CTGAAGCGGT TGTGCGCTGA
 
Protein sequence
MDTGNFSAAD RLERLPVSGY HRIIFIIIAL AFFFDSMDLA MMTFLLGSIK AEFGLSSAQA 
GLLASSSFFG MVLGASLSGL LADRFGRKPV FQWSIVLWGL ASYLCSTAQT VESLTLFRIL
LGIGMGMEFP IAQSMLSELI PAQRRGRYIA LMDGFWPLGF VAAGVLSYFL LPLIGWRDIF
LVLAVPAVFV LAIRFFIPES PRWLEQAGKH DEADKVLRGI EARVQASLGG AALPEPVRLP
RSVTPPGHFL SALKQIWSPL YRQRTTMIWS LWFFALLGFY GLTSWLSALL QQSGFAVTQS
VYYTVLISLG GIPGFLMAAW LVERWGRKPV CIVTLLGGGV MAFLYGQSAV FGGNVALLIG
TGLLMQFFLF GMWAVLYTYT PELYPTSARA TGSGFASAIG RVGSLLGPLV TGLVFPITGQ
GGVFALGALC FTIAAGVVWL FGMETRGKTL EELTEAVVR