Gene Pfl01_0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0668 
Symbol 
ID3713953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp781733 
End bp782662 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content64% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_346401 
Protein GI77456896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTT TCGATGACTT GCAGTTGTTT GTCCGGGCGG CGGATCTGGG CAGCCTGTCG 
GCGGCGGCTC GGGTGATGGA CCTGTCCGCC GCTGTGGCCA GTGCCGCGCT CAAACGTATA
GAACAGCAAC TGGGCGCGCG GCTGTTGGCA CGCTCCACTC GCAGTTTGCG GCTGACGGCC
GAAGGCGAGG GGTTTCTCGA GTACGCCCGG GCGGCGCTGA GCAACCTCGA TGAGGGTCGG
CGTCTGCTGG CCAGCGGGCA GGATCAGGTC AGCGGGATTC TGCAGCTGTC GGCGCCTTCG
GATTTCGGTC GCAACCTGCT GTTGCCGTGG CTCGACGATT TTCAGCACGA ACACCCGAAG
CTGACGGTAC GTCTGCTGCT GGGTGACCGC ATCGCTGATC TGTTTCGCCA GCCGGTAGAC
ATCGCCTTGC GCTACGGCGA GCCGGAGGAT TCGAGCCTGG TGGCGTTGCC GATTGCCCCG
CACAACCGAC GGGTACTGTG CGCATCCCCC GCCTACCTGG CCAGGCACGG CGAGCCGCTG
CATCTGGAAC AACTCGCGCA GCACAACTGC CTGCTGTACA TGCTCGGCGG CCGGGTACAT
GACCATTGGA GTTTTCATGA CGGCAGGCGC GAGGTCGGCC TGACCGTCAG TGGCGACCGC
TTCAGTGACG ACGCCGATGT GGTTCGCCTG TGGGCGGTGG CGGGAGCCGG CATCGCTTAC
AAGTCCTGGC TCGATGTGGC CGGTGATGTG CTGGCGGGAC GGCTGAAAGT GCTGTTGCCG
GAGTTGCTCT GCGAACGCGC TCCGCTGAAT CTGCTGTGCG CCCATCGCGC ACAATTGAGT
AAGCCGGTGA ACCTTCTGAG GGAAATGCTC GCCAGTCGTT GCGCCGAATT GAGTAGCCGA
TTTCCCGTTT TCACGGAGAC TGATCATTAG
 
Protein sequence
MLRFDDLQLF VRAADLGSLS AAARVMDLSA AVASAALKRI EQQLGARLLA RSTRSLRLTA 
EGEGFLEYAR AALSNLDEGR RLLASGQDQV SGILQLSAPS DFGRNLLLPW LDDFQHEHPK
LTVRLLLGDR IADLFRQPVD IALRYGEPED SSLVALPIAP HNRRVLCASP AYLARHGEPL
HLEQLAQHNC LLYMLGGRVH DHWSFHDGRR EVGLTVSGDR FSDDADVVRL WAVAGAGIAY
KSWLDVAGDV LAGRLKVLLP ELLCERAPLN LLCAHRAQLS KPVNLLREML ASRCAELSSR
FPVFTETDH