Gene Pfl01_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0637 
Symbol 
ID3712394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp747902 
End bp750667 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content65% 
IMG OID 
ProductPAS/PAC sensor Signal transduction histidine kinase 
Protein accessionYP_346370 
Protein GI77456865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTCCG GTGACAAGCT GTTCGACCGC CTGCTCAATC GTCAAACGTC CACACCGCCA 
GCGGTCATGG ACGACCCCGT GGTGCCCGGC GTCGGTTTGC AGCTGCATCT GGATGGCGAA
GGCCAGGTCA TCCACCTGAC CGGGCCACTG CGCCATGTGC TGGCGCAACA ACTGTCCGCC
GCTCGCACGC CGCATCTGCT CGATTACCTG CTGCCGCACA GCGCGCTTGC GGTCGAAGGC
GTGCCCGCCG ACTGGCAGGG ACAGTTGCTC GATCTGGATT TTTTCAGCCT CGCCGGTCCG
CCGCTGCACT TGCGCGGCTG GGTACAGCCG CAGGGGGATG GCTGGGTTCT GCAACTGCTG
GATATCGGCG ACCTGCTGAG CGAAAGACGT CAGGCGCACA GCCGCGAGCA ATGCCAGTGG
CTCGCCGCAC ACATCCGCGA CCACTTGCGG CTCTGCGGCC TGGCGCGTCT GCCACAGGTG
CTGGGCGAAC AGTTGCAGTG CCTGAGCCAG CGTTTTCAGG TGCCTTGCCT GGCCGTAGCG
CTGCTGGATG AAGAGACCGA GGGCTGGCAG ATTCATCAGC ATTACAGCGC ACCCGACGCC
CCGCGACTGT GGGATATGGC GCAGCGCCTG GGTACCGGAC TCGACAGCCT TAACGGCGCC
GCACCGCAAC GCGTGCTGCC CGCCGAGCAT CCCCGCCTGA GCAGCGTGTT CGGCCCCGCC
GAAGGGTTTG CCGTGCCTTA CCGCGACGCC CATGGCGTGG CGGCATGGTT GCTCTTCGGC
TGTTTCAGCG CGCAGCCACA CACCGCCGAG TTGAGCGATC ACGACTGGCT GCAACTGGCC
GCCGCCGTCG CCGCGCCGCT GCTGGAACGC CTGCGTGAAC ATCGTCACCA CTTGCAGCTG
GAACGTCTGG AAATCCTGCA AAGCCTGCTC GGCACCGGTT GGTGGGAGGT GTTCAGCGAC
AGCGCCGAAG TGCTGCTCGC CGATGCGCTG GCCGTCAGCC TCGGCTTGAG CGCCGGGCGC
CTGCCGATTC AGGCCTGGTT CGCCCGGGTG CACCCGGCCG ACCGCGAAGA ACTGCGCAGC
CGCCTGCAAG CCTTGCAGGA CGAAGGTCAG GCGCTGGAGC TGTGCGTGCG CCTGCAACCC
GTTGATCAGG CGCAACCGCA GTGGTTCCGC TTGCAGGGCC AGTCACTGGG CATCGGCGCC
GAGCGGCGTC TCGTAGGCTT CATGCTCGAC ATCAGCGACA TCAAGAACCA GCAACAGCAG
GCCGCCGCTG CCCATGCGCG ACTGGACAAC CTGATCGCCA GCGCGCCAGC GGTGATCTAC
GTGCAGCGCT ATGTCGAGGG CGCGCTGCAG CCGACGTTTT TCAGCGCCAG CCTGCAACCA
TTGCTGGGCT GGAGCCTTGC CGACTGCGCC GACGGTGCGC TGGTGAATCA TGTCCATCCC
GACGATCGCG CGGCGTATTT CGAACGCACC CGGCAGTTGT TGCGCGAAGG TTCGGTGAGC
ACGCGCTACC GGATGCTCGA CACCCAGGGC AACACCCACT GGCTGCTCGA CGAAGCCAAA
CTGTTGCGCG ACGATCTCGG TCTGCCAGTG GAGGCTGTCG GGCTGTGGCT GGACGTTACC
GACGCGACCC TCGCCGCCGA GCGGATCAAG ACCAGCGAAG AACGCTATCG CATCCTCGTG
GAAGATTCGC CGGCCATGAT CTGCCGCTAT CGCCCCGACC TGACCCTGAC CTTCGGCAAC
CGGCCACTGG CGATGTATCT GGAGTGCGCC CCGGAACAAC TGCCGGGGGT GAATCTGGGC
AGCTGGATGT CGGACGAACA ACGCGAGGCC TTCGTCCAGC GTCTGGCGCA ACTGACTCCG
GACGCGCCGG TGAGCAGTGC CGAAATCAAC CTGCGCCTGC CGGGGCGCGA ACATGCGTGG
TGGATCTGGT CGGATCGCGG AGTGTTCGAC GAGCAGGGCC GTCTGCTTGA AGTGCAAGCG
GTGGGCCGTG ACAACACCGA GGTCCGGCGT TCGCAGCAAC AACTGACCCA AAGCGCGAAA
ATGGCCACCC TCGGCGAGAT GGCCACGGGG CTGGCCCACG AGATCAATCA GCCGCTGAAC
GTGATGCGCA TGGCCATCGT CAACGTGCTC AAACGTCTGG GCAACGGCGA TGTGCAGATC
GACTACCTGA CCGACAAGCT CAACCGCATC GACACTCAGG TCCAGCGTGC GGCGCGGGTG
GTCGATCACA TGCGGGTGTT CGGCCGGCGC TCGGAAATCG AACAGCACCC GTTCAATCCG
CTCGACGCCA TCGAAGGCAC CTTGTCGTTG CTGTCCGAAG GTCTGCGCGG CAAAGGCGTC
GAGCTACGAA TCGGCGAGGC GAACTTCCAG CTGCAGGTGC GCGGGTACGT CGATCAATTG
GAACAGGTGT TGATCAACCT GATGGTCAAC GCCCGGGACG CGCTGTTGAG CAAGCGTGAA
TCCAATCGCG ACTTCCAGCC GTGGATTGCC GTGCATGCCG AACACGACGA ACACGTGGTG
CGGCTGTGGG TCGAGGACAA CGGCGGCGGC ATCGATCCGC GTTTGCTGGA GCGGATTTTC
GAGCCGTTCT TCACCACCAA ACCGGTGGGC GTCGGCACTG GCCTGGGCTT GTCGGTGAGT
TACGGCATCG TCGAGAACAT GGGCGGACGC CTGAGCGTGC GCAACGGCGA CGACGGCGCC
CGGTTCTGCA TCGAATTGCC GATCGCCCTC GACGATCAGA TCACCAGCGT CGCCCGCCCC
GACTGA
 
Protein sequence
MSSGDKLFDR LLNRQTSTPP AVMDDPVVPG VGLQLHLDGE GQVIHLTGPL RHVLAQQLSA 
ARTPHLLDYL LPHSALAVEG VPADWQGQLL DLDFFSLAGP PLHLRGWVQP QGDGWVLQLL
DIGDLLSERR QAHSREQCQW LAAHIRDHLR LCGLARLPQV LGEQLQCLSQ RFQVPCLAVA
LLDEETEGWQ IHQHYSAPDA PRLWDMAQRL GTGLDSLNGA APQRVLPAEH PRLSSVFGPA
EGFAVPYRDA HGVAAWLLFG CFSAQPHTAE LSDHDWLQLA AAVAAPLLER LREHRHHLQL
ERLEILQSLL GTGWWEVFSD SAEVLLADAL AVSLGLSAGR LPIQAWFARV HPADREELRS
RLQALQDEGQ ALELCVRLQP VDQAQPQWFR LQGQSLGIGA ERRLVGFMLD ISDIKNQQQQ
AAAAHARLDN LIASAPAVIY VQRYVEGALQ PTFFSASLQP LLGWSLADCA DGALVNHVHP
DDRAAYFERT RQLLREGSVS TRYRMLDTQG NTHWLLDEAK LLRDDLGLPV EAVGLWLDVT
DATLAAERIK TSEERYRILV EDSPAMICRY RPDLTLTFGN RPLAMYLECA PEQLPGVNLG
SWMSDEQREA FVQRLAQLTP DAPVSSAEIN LRLPGREHAW WIWSDRGVFD EQGRLLEVQA
VGRDNTEVRR SQQQLTQSAK MATLGEMATG LAHEINQPLN VMRMAIVNVL KRLGNGDVQI
DYLTDKLNRI DTQVQRAARV VDHMRVFGRR SEIEQHPFNP LDAIEGTLSL LSEGLRGKGV
ELRIGEANFQ LQVRGYVDQL EQVLINLMVN ARDALLSKRE SNRDFQPWIA VHAEHDEHVV
RLWVEDNGGG IDPRLLERIF EPFFTTKPVG VGTGLGLSVS YGIVENMGGR LSVRNGDDGA
RFCIELPIAL DDQITSVARP D