Gene Pfl01_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0630 
Symbol 
ID3712387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp741694 
End bp743043 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content67% 
IMG OID 
Productmulti anti extrusion protein MatE 
Protein accessionYP_346363 
Protein GI77456858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACC TGATCACCGA CTGGCGCGAC CGCCCGACCC ATCGCCGGGT CTGGGCCCTC 
GCCGCCCCCA TGATCCTCTC CAACATTTCC GTGCCACTGG TGGCGCTGGT CGACAGCACC
GTCATCGGCC ACCTGCCCCA TGCCCATCAA CTGGGCGCGG TGGCCGTGGG TGCCAGCCTG
TACACCTTTC TGGCCTGGGC CATGGGATTC CTGCGCATGG GCACCACCGG CTTCGCCGCC
CAGGCTGCGG GTCGCAGCGA TGGTGCAGCC TTGCGGCAGA TTCTGCTTCA GGGCCTGCTG
CTGGCGATGG GGCTGGCGCT GCTGCTTGGA ACGCTGGGCG TACCGCTGAG CGGGGTCGCG
CTGCACTTCA TGCAACCGTC GGCGGAGCTG GATCAGCTGA CCCGCGACTT CTTCCACACC
CGCCTGTTCG GATTGCCGGC AGCGCTGGCC AGTTATGCGC TGGTCGGCTG GTTCCTCGGC
ACCCAGAATG CCCGGGCGCC GCTGGCTATT CTGCTGAGCA CCAACCTGAT CAACATCGTG
CTCAACCTGT GGTTCGTGAT TGGCCTGGAC TGGGGCGTGG TCGGTTCGGC GCGCGCCTCG
GTGATCGCCG AATGGAGCGG CGCCCTGCTC GGTCTGTGGA TGACTCGCAA GGCTTTGCGC
GCCTATCCCG GCCACATCGC CTGGGCCGCC CTGAAACTCT GGCAGAGCTG GCGCCCGCTG
CTGGCGGTCA ACCGCGACAT TTTCATCCGC AGCCTGGCCC TGCAATCGGT GTTTTTCCTG
ATCACCGTGC AGGGCGCGCG ACTGGGCGAT GCCACCGTCG CGGCGAACGC GCTGTTGCTC
AACGGCCTGC TGTTGACCGC CCACGCGCTG GACGGACTGG CCCACGCCGT CGAAGCCTTG
TGCGGCCACG CCATCGGCGC CCGGGATCGT CTGGCCCTGC GCCGCTCGCT GGTGGTTGCC
GGTGGCTGGT CGTTGCTGGC GAGCCTGGGC TTTGCCGCGC TGTTTCTGTT GGCCGGCCAC
TTGTTCATCG AAATGCAGAC CGACATCCAG AGCGTGCGCG AGACCGCGTT CATCTACCTG
CCCTATCTGG CCGTGCTGCC GTTGATCGCA GTCTGGAGCT ACTTGCTCGA CGGCTTGTTC
ATCGGTGCCA CCCGCGCCCG GGAAATGCGC AACGGCATGC TGGCGACCGT GATCCTGCTG
CTGCCGGTCG CCTGGGCGCT GCAAGGTCTG GGCAATCACG GCCTGTGGAT TTCATTCCTG
CTGTTCATGG TGCTGCGCAG CCTGACGCTC GGGGGACTGG CGTGGTGGCT GCGGCGCACC
GATGGCTGGT TCAGCGGTGC CGCTCACTGA
 
Protein sequence
MSNLITDWRD RPTHRRVWAL AAPMILSNIS VPLVALVDST VIGHLPHAHQ LGAVAVGASL 
YTFLAWAMGF LRMGTTGFAA QAAGRSDGAA LRQILLQGLL LAMGLALLLG TLGVPLSGVA
LHFMQPSAEL DQLTRDFFHT RLFGLPAALA SYALVGWFLG TQNARAPLAI LLSTNLINIV
LNLWFVIGLD WGVVGSARAS VIAEWSGALL GLWMTRKALR AYPGHIAWAA LKLWQSWRPL
LAVNRDIFIR SLALQSVFFL ITVQGARLGD ATVAANALLL NGLLLTAHAL DGLAHAVEAL
CGHAIGARDR LALRRSLVVA GGWSLLASLG FAALFLLAGH LFIEMQTDIQ SVRETAFIYL
PYLAVLPLIA VWSYLLDGLF IGATRAREMR NGMLATVILL LPVAWALQGL GNHGLWISFL
LFMVLRSLTL GGLAWWLRRT DGWFSGAAH