Gene Pfl01_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0620 
Symbol 
ID3712377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp728493 
End bp728948 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content59% 
IMG OID 
Product3-dehydroquinate dehydratase 
Protein accessionYP_346353 
Protein GI77456848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0159708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC TACTGGTGCT GCACGGCCCC AACCTGAACC TGCTCGGCAC CCGGGAACCC 
GGGACCTACG GGTCGACCAC CCTGGCGCAG ATCAATCAGG ATCTGGAACG CCGCGCCCGT
GAAGCCGGCC ATCATCTGCT GTATCTGCAA AGCAATGCCG AGTACGAATT GATCGATCGC
ATCCACGCCG CACGCGGCGA GGGCGTGGAC TTCATTCTGA TCAACCCGGC AGCATTTACA
CACACAAGTG TCGCATTACG TGACGCGCTG CTGGGAGTGA GCATCCCATT CATCGAAGTG
CATTTGTCCA ACGTGCACAA ACGCGAACCT TTCCGCCATC ACTCTTACTT CTCCGATGTA
GCGGTAGGAG TGATCTGCGG CCTTGGCGCC AGCGGTTACC GACTGGCCCT GGAGGCTGCA
CTAGAGCAGC TTGAACACCA AGCTAAACGC CCCTGA
 
Protein sequence
MATLLVLHGP NLNLLGTREP GTYGSTTLAQ INQDLERRAR EAGHHLLYLQ SNAEYELIDR 
IHAARGEGVD FILINPAAFT HTSVALRDAL LGVSIPFIEV HLSNVHKREP FRHHSYFSDV
AVGVICGLGA SGYRLALEAA LEQLEHQAKR P