Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0617 |
Symbol | prmA |
ID | 3712127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 725580 |
End bp | 726458 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_346350 |
Protein GI | 77456845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00809563 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTGGC TGCAAGTCCG TCTCGCCATC AGCCCAGAAC AAGCCGAAAC CTACGAAGAC GCTTTTCTTG AAGTGGGCGC CGTTTCGGTG ACCTTCATGG ACGCCGAAGA TCAGCCGATC TTCGAACCGG AACTCAATAC CACCCCGCTG TGGGCGCACA CCCACCTGCT GGCCCTGTTC GAGGGCGGCA CCGAAGCCGC CCCGTTACTG GCCCATCTGG AACTGCTGAC CGGCAGCCCG CTGCCCGAGC ACCACAGCGA AGTCATCGAA GACCAGGACT GGGAACGCAG CTGGATGGAT GGTTTCCAGC CGATGCGTTT CGGCCAGCGT CTGTGGATCG TGCCGAGCTG GCACGCCGCC CCGGAGCCGG ACGCGGTCAA CCTGCTGCTG GACCCGGGCC TGGCGTTCGG CACCGGCACC CACCCGACCA CCGCCCTGTG CCTGGAATGG CTGGACGGCC AGGACCTGAA AGACTGCAAC GTGCTGGACT TTGGCTGCGG CTCGGGGATT CTGGCGATTG CCGCCCTGCT GCTCGGCGCG AAAGAAGCCG TGGGCACCGA CATCGATGTG CAGGCGCTGG AAGCGTCCCG CGACAACGCC GGGCGCAACA ATATCGCTGA CGAACTGTTC CCGCTGTACC TGCCGGAAGA ACTGCCGCAG GTCAAAGCCG ACGTACTGGT CGCCAACATT CTGGCCGGCC CGCTGGTTTC CCTGGCGCCG CAACTGTCCG GCCTGGTCAA GTCCGGCGGG CGTCTGGCAC TGTCCGGGAT CCTCGCCGAA CAAGGTGACG AAGTCGCCGC TGCCTACGCG CAGGACTTCG ATCTCGACCC GATCGCCAAT CGTGATGGCT GGGTGCGCAT CACCGGCCGT CGGCGCTAG
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Protein sequence | MPWLQVRLAI SPEQAETYED AFLEVGAVSV TFMDAEDQPI FEPELNTTPL WAHTHLLALF EGGTEAAPLL AHLELLTGSP LPEHHSEVIE DQDWERSWMD GFQPMRFGQR LWIVPSWHAA PEPDAVNLLL DPGLAFGTGT HPTTALCLEW LDGQDLKDCN VLDFGCGSGI LAIAALLLGA KEAVGTDIDV QALEASRDNA GRNNIADELF PLYLPEELPQ VKADVLVANI LAGPLVSLAP QLSGLVKSGG RLALSGILAE QGDEVAAAYA QDFDLDPIAN RDGWVRITGR RR
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