Gene Pfl01_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0616 
Symbol 
ID3712126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp724281 
End bp725549 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346349 
Protein GI77456844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.037399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GCTTCGTCAC CCAGTGCCCG CATTGCCAAA CCAGTTTCCG CGTCAGCCAC 
GCTCAGTTGA GCGTGGCCCG CGGAGTGGTT CGTTGCGGCT CCTGTCTGCA AGTGTTCAAT
GCCGCCAAGC AATTGCTGGA GCAACACGCT GGCAAGGAAG CTGTCACGCC GGTGGCGCCG
TTAATCAGCG AGCCACCGCC GATCAGCGAG CCTGCGCCTG CCGAGCCACC GGCCATCGTC
GAAACGCCCG AGCCGCGCGC CGTCAGCCAG AAGCAATGGA GCGCCACCGA GCTGGATCTG
GACAGTCTGG ATCTGGACGA AGAACTGGCC CGCCTCGAAC AACGGGAAAT CCAGCCGACC
ACCGAGTTCG GCCGCCCGCG CGAAGACGCC CTGAGCGCTC GCCGTGACAG CCACGAACCG
GAAGACACGA AATGGCCGGA CAGCCTGTTC AGCGAGCCGG CGGATGAACG CGCACCCGAA
GTCGAAGAAG AACCCGAAGC CATCGAGCCC GAGCCGATTC GATCAGAGCG CACCGAACCC
TCGCTGTCGC TGGAACCGGT GGATCTCGAC GACGAACCGC CGATCCCGCA ACTGCGCCTG
CACGATCCGA TCGACCCGAA TGCCCGTCGC GAACGCCTGT CGGCCAGCGA CGACGTCGAC
GACGAACTGC CACTGATCGA ACCTGCACGC AAAAAACGCG AACGCGTCGA ATCCAGCGTT
CGCGCCGAAG CCTTGCAGGA CCTGACCGAC GACCCGCTGC AACTGGACTG GCAGAAACGC
CGCTCGCCCT GGGGCCGTCG TCTGCTCTGG CTGTTGCTGA TCGTACTCGC CGCTGCCGGT
CTGGGTGGAC AATACATCGC CTATCACTTC GATGAACTGG CCCGCCAGGA TCAATACCGG
CCATGGTTCC AGCAACTGTG TCCGCAAGTC GGCTGCACGG TGCCGTCCAA GGTGGATATC
GCCAAGATCA AGAGCAGCAA CCTGGTGGTG CGCAGCCACC CGGAATTCAG CGGTGCGCTG
GTGGTGGACG CAATCATCTA TAACCGCGCG CCGTTCTCGC AGCCGTTTCC GCTGCTGGAG
CTGCGCTTCG CCGACCTCAA CGGTCACCTG ATCGCCAGTC GTCGCTTCAA GCCCGGCGAA
TACCTCAACG GCGACCTCGA AGGCATGGCG GAAATGCCGC CGCAGACGCC GATCCACATC
GCCCTGGACA TCCTCGATCC AGGCCCGAAA GCCGTGAACT ACAGCCTGAG TTTCCACTCG
CCCGAGTGA
 
Protein sequence
MTDSFVTQCP HCQTSFRVSH AQLSVARGVV RCGSCLQVFN AAKQLLEQHA GKEAVTPVAP 
LISEPPPISE PAPAEPPAIV ETPEPRAVSQ KQWSATELDL DSLDLDEELA RLEQREIQPT
TEFGRPREDA LSARRDSHEP EDTKWPDSLF SEPADERAPE VEEEPEAIEP EPIRSERTEP
SLSLEPVDLD DEPPIPQLRL HDPIDPNARR ERLSASDDVD DELPLIEPAR KKRERVESSV
RAEALQDLTD DPLQLDWQKR RSPWGRRLLW LLLIVLAAAG LGGQYIAYHF DELARQDQYR
PWFQQLCPQV GCTVPSKVDI AKIKSSNLVV RSHPEFSGAL VVDAIIYNRA PFSQPFPLLE
LRFADLNGHL IASRRFKPGE YLNGDLEGMA EMPPQTPIHI ALDILDPGPK AVNYSLSFHS
PE