| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0608 |
|---|
| Symbol | |
|---|
| ID | 3712118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 701376 |
|---|
| End bp | 708518 |
|---|
| Gene Length | 7143 bp |
|---|
| Protein Length | 2380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_346341 |
|---|
| Protein GI | 77456836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.998131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGTG CTGAAAATTC AAAAGTTGAG AAAGGCTTTG TAAAGTTCGT CGACTTGTTC
AAGCTGGCCG ACCTGGAGCG GGCATTATTG CCGCATAAAG GAACTGAGCA GTACGACGCA
GTGATTCGTT ATTACTTCGC CTGCATCGGT CTGCTCGATT CGCCACGCCT GTTGCAGCCG
CTGACATTGT TCAAGCAGGC TCTGGGAGAG CTGGGAAACC ATCGAGTGCG CCGTGAAGCG
GAAAATGCAC CGGCCCCGAG CCCGGACAGC GAGGCGGCCC TCAGTTTTGC GCAAGTAAGC
GACCGGGTCG AGGGTTTTGA GGCGCGTCTG CGCTACGGCG TTGAACTGAT GAAGACTCCT
GCCACCCAAG TGCCGAAAAT CCTGCACTTT GTATGGCTCG GTGGCGGGCT GGGTGATATT
CAGCGTGATT ACATCAATGT CTGGAAAAAG GTACTTGCCG GGCAGGGTTA TAAAATCAAT
GTCTGGTATG ACAATGATGC TTTGCTCGCA TATCGAACCA ACCAGCTTGT TGTAGAAGCT
GCCAAAGCCG ATGCCATGCA GCACGGTGGT GTCGACAGTG CGACCGAGCG GGAATTGGGG
GAGCTCTATG TCGCGCGTGT CATTGCGCTA AAACAGCAGA TGTACCAATA CATTAATGAT
GCGGTCGCCA AGGGCGAGTC GGCCGATGCG GCGCGAATGC AGTTACTGGT TCGAGGATAC
GGGCAGGACG CACAGGAACT ACGGCGTCTG AAAACAACTA ACCGTGACAG TATCCAGGCG
CTTGTCGACG GTGATGTGCA GGTGCGCGAT CTGGCTGGCG CCGAGAAGCC TTTGCAGCTG
CAGGCCCTTT ACCAGCGTGA AATGCGTTTG CGCGGCAATT TCGCCGCAGC GTCGGATGTT
GTAAGAGCCG AGGTGTTGCA CCTGGAGGGT GGCAGTTACA CCGATGTGGA TAATTTGCCG
CCACTGTTGA AGTCGGTTGG GGGGGTCGAT ATCAGTGGCT TCAGTGACGA TGCCCGATTG
GGTCTGTTGC AATTGTTGCT CAACGAAAAC CCGGAATGGA TGCCGGGGCG GCAAGCGCTG
AAAAGCCGCT ATGTGGACAG AACCGACGAG ATTCCCGAAG CGCATCGGCA GGCACTGCAA
GCGTTTGCCA AAGGCAAACC GCTGCTAGCC CAGGTTTTTC AACCACCTCA GGATTTGCTT
GTCCGCCCCT ACGCTTTGCG AGCGGTGGCG GTGAGATCGA CGATCAGTAA CGGGTACATG
ATGGCGCACC CGGGCTCGGC GGTGCTGGAG TCTGTACTCA AGCGTCTTGA GTTCAACCTC
GGACTGGTGG ATGCCACCGC TCGACTGGCT GTGCAGAGGG GGGTCAAACC CGAGGATTCC
GAGGCAATGC AATCACTGGC GCTCGAAGAA CTCGAGCGCA CCTACGGGTC TATCAATGAC
CTGCCGGACA TGGAGTCGGT CTTTGCGACC TACCTGGCCG ATGCGGCCGC CAGTTACTAC
AACGATGGCA TTCGCCCGCA GAGTGAAGGG ACGATTTATC TGACCGGTCC AGTGGGGATA
AAGGATGGCA CGAGTGATTT CGAGAAGGCC CGTTTAACGC CTCGGGGGGC GCAGGTGTCA
CGCGAGGAAA TGGCGATCGA ACCCTTGCTC GTCGTCAATC GAGCCACCGA GGAAGAGTTG
GATCACTCGT GGAAAGATAA CGAAACCGAC TTCGACAAGT GGGTGGAATC CGAAAAGCAG
CGCTGGCGCG ACGGTCAATT CAAGACCCGC TACGCCGGCA ATATTGACGA ACTGCTCAAG
CACTCCACCG TTGAATTCGA ACTTGGCTGG CCCTTGATCG AGGGGCGCCA TGTGATCAAT
ACCGAACTGT TGCAACGCAT GGCTGACCAT CTTGGCGAGC CCTTCACCCG AGCAATGATG
AGCGGCCATG ATGGCCCGGT CACGTTTGCC GATAGGATAC CGCTTGATTT CAATGATCGT
CAGTTGATCC GCAATCAGGA CACCAGGCGG CGCCCGCCCG CGTCACGGAG TCATGAGGTG
ACACGAAGTC TTGCGCTGGA TGAAATTCTC ACAGGTCTGG GTACAGGCGC ATGGCAACTG
GCGCACCTCA GCCCGCTGCA GCGTCTGACG CTCGGGGCAT TGCTCGGTGC AGAGTCACTG
GATGAGCAGA GTTTTGCCGC ACTGGGCGGC GCGCTGGACA ACCTGATCAA CAGCCTCAGC
GAACGCGGGA CTTCCGGGCG TTACGCTGCG ATCGAGCAGC ATCTCTACCA GCGGCGCCCA
GCCGAGTTCG TTGCCGGGCT GAAAAGTGTC GCCGACGTGT TGCCGACGAG TTCGAGCAAT
GCGCTGAGCC TGAAGAAAAC AGCATTGTCC ACCGCGGTGA CCCTGCATGA CTGGGGACGT
CAGGTCGCGC TGATTCAGTA TGTCGCCACC CAGGAACACC GTCAGCAAGT TCAGGAACGG
GTGGAGCAGG TGCTCAACCA ATTCGAGGCC GGTACCGTCA AGATGGTACC GCAGGATCTG
TTGCTGCACG GGGCGGGTGA CACGGTCGCC GGTCGCTGCT TCCCTCTCGT GCTGGCGATG
AGTGCGGCCC TGACGCAAGG TGAAGCGGCC AGCCGACGCT TGCGCGAAAG GTTCTTCCTC
GCGGTACTTG AGCCGGATCA GGCTGACTCC CAGGCGTTTT TGCAGGCTGT GGAGGAAATG
CACGGGGTCA AGGCCGGCGA CGTGGGTACC GTTCTGGGGC GGCTGGATCT GGAGACAGTC
GCCGCAACGC TGGAGGCATC AGTCGGTACC CGAACCCTGA TGCTCAACTC CGACAATCAC
TCGATGCTGG TAGCCAGAAC CGAGAGCGGC ACCAACGTTA CGTATCACTT TTACGATCCA
AACTTTGGTG TGTTCGAATT CGACAGTTCC GTCTCGTTTA AAGTGGCGCT GGGAAAATTC
TTCCGGTTGG GGATGGCCAG ACATTACGCT GCCTACGGTG AGGCCGACCA TCCGCGGTTC
GATTTGATCG ACATAAAGGG CCAGCAGGTC TCGGAGCAGA TGCTGTCGAC AGGCGTCAAA
GTGGCACACT TGTTCACGGA GGACACCTTG CCGAACGTAC CGTTGCGCAA GGTTCGCCAG
CGGCTGAACA GTGCGCACGG TCGAGCCTTG ATGGAAAATC CGCGCCTGGG CCGCGCGTTG
TTTGATGCCG ACCATCACTG GTGGGCCGAG CAGATTGCCA GCGCGACGTC GCGCTTGCAG
GAAGGGCATG ACTCGGTGTC GCCGCTGGTG CCATTGTTCA GCTCGCTGGA GTTCACACAC
GAGGGCCCGT ACCGGCTTGG CATGCTGGAC CCGAATACGG GTGAGCTCGT GGCGACGGTG
ACCAGCATCG ACGGGCGCCT GTTGCGTATC AGGAACTATC TGTCCGAGCT GTTCTCGACC
CTCGGACGCA AGCCGGTCAA GGCGGGTGCA ACGCAGCAAG CCACAGAAGC GGCGGCTGTT
CACACCCTCA ATGCCGGATT CGCAGTTCAG GCATTGATGA ATGCCCTGCG TGGACGCGAA
GGCGACGACC GGACCATGAC CACTGCCGTG CGCTGGCATG CGTATGTCAA CTATGCACAA
CTGGCACATG GCACTCTGTT CGACGCGGCG GGACTGATCG CGCTGGTAAA GGAGGCACTG
CGCGATGAAA AAATCATTGC CCGGACCAGT GCGCGGGTCG TCGGCGAAGC GCTGGCGCCA
TTGACAGGTA AAACCATCGG GGCGGTGGCT GGACATGTGG CCAATGAGGG CGTGGGGGCT
GTGCTGGGGC TGGCCAACGT CGGGTTCGAT ATTTATCAGT TGGCGACGGC GCAGAACGAT
CTCGAAACCG TGACCTACGC CACCCAGCTG ACATTCGATG CCACCAGCCT CGCCCTGACC
GGTGCCGGAA TGGGCGCGGG GCTTGCCGGG GCCGGAACGG CGGCAGCAGT GCTGGGTGGC
GCGGGCGTGA TTATCGGCGG GCTGGCGGTG GGCGTGACTG CATTGGCACA GGCGTACGCG
ATCATTGCGG AGGAGGCGAA AGCGGTCGGT CTGTTTTTCA ACGAGCTCGA ACAGGCTCAC
CGCGGCCAGG CCTACCACTA CAAACCCACG CAGGATGTCT GGCTGCCGCG CGCGTCTCTG
ATAGTCACTG ACATTGACAT GGACACTGGA GAGGTGTCGC TGGAGAGCAC CAAACTCTAC
CCGCTGCGCG ATCATTTCGG TGTGCCGGAA TTCGAGGCGG ACTACGCGCG TGCAATCAAC
CTCAGCAAGG AACTGGGTTA TCCCGACCGC ATGCGTTTCG TTCCCCCGGC CGACCAGGCG
ATCGTGTTGC CGTGTACGCC CCAGGCCTGC TATCGCTACG AATACCAGAC ATTGCCTTTC
TCCTCGCAAC GCCATGACAC GGGCTTCGAT ATCGCCCGGC GTCTGGAGAA GAGGAAGCCG
GATGGCAAAT GGCTGTTCCT GCATTCGTTC TACTCGTTCC CCAGCCACTA CATCGTCAAT
CGGCTGTGGC CGGATTACCG TGCGACCCAA ATCAGCGTCA AGCTCGATGC GCGGGAGCGC
AAACTGGTGG TGCCGAATAT CCCGCCGGCG TGGCAGGACA AACTTTCCTA TCGACTGCAA
GGTGGCGCAA GCCTCTGCAC CTTGGTGCTC AGTCCCGGTG CCAATGTCGA ACTGGTGTCA
GCGGGCACAC AGAACAATCG CTGGATTCTG GTAGCACCCT GGGCGAGTGA AAGCGACATT
CAATTCGGCA AGACCGGCGC GTTCAGTGTG AAGGACTGTC AGTTCAAAAT GTCGGGAACC
GGACCGTCCG AGGTGTTTCT GGTCATCGAC GGTGGCCGCC TGCTGAAGGT CGAGGGCAGT
CAGCAACGCC GGTTGGTGGT GGTACAGGAA CAGGCGCCGA AGGGCATCGA CGGTCAGGTG
TTGCAGGATC ATCTGCTGGC GTTGGCCAGG GACCATCGAT TGGCGCTGCC CTATACGCGG
ATCAACAACT ATCCGATCCC CTTTGAAAAA GCCGAAGCGC CGCGTTACAC CACCGGTTGG
TATGACGCCG CAGAGGATCG TGTTCTGCAC ATCCGTAACG ACTACGATCT CTCGGAAGAG
GATCTGATGT TGTCCGCCGT AGCCGGCGAG TTTGCGTATT TCCATGAAAA AGACGGTTTC
GACATCTTGC AGGTCGATGC GAGCACCGGA CTGCTCAGCC ATCGCTATCG CCTGCTGGTC
AGGAAGCAGG GGACCGGTAC GATTCGCAGT GTGGAAGCCG ACGGCCATGG GGTTCTCCAC
GTCGTGCAGG AATATGTCCA GCCGGACGCA ACGGTTGAGC GCTTCAATTA CCTGATTCAC
GACGGACAGA TGTGGCTGAG TTCGGTGAAC CGCGGTCTTG AATTGCAATT CGAGGCGTTG
CTCGATGACC GTCATGCCCT GACTGACTGG GTGCCTGTGC TGGGGGACAG GTTTTTGTTC
CCGCCGGTTC TCGGCGAGCG GGAATACACG ACGGTCGACT GGCAGTTCGC GCCTTACGTT
TCCATCTGCT GGAAAATGGA TGAGACACTG CGCGACATGG CGTGGATTCG TTCCCGGGAC
AACCTGATCA TCCGTCCGGT GCCACGTCGT CATCATCTGC GCGGCTGGCG TGACTCTGTG
CAGAATCTGA ATGATCTGAT GTTGCTCACC GTTGCTGGTG ACAACGATGT ATTCGTCATC
TACGACCGAC TCTTCCAGAA GTTGTGCCGG GTGGAGCGCA CCGTGGTGCA GGGCGAGAAT
CGCTGGTCGC ATCGTTGGGT CCAGCCTGAT CGGCTCAAGG AGGTAATCGC CGAGCAGAAC
AGTTATCTGG CGAAGACCGA AGACGGGCTG GTCTTCGAGA TGGGGGCCGA TGGCAACGCG
CAGTTTGCCG GAGTCGGTGA GCGCTGGCTC AAGGGCCGTG CACAATGGTG GCTGGCGCTG
GAATCTCTGG CCCTTCAGCA CGAGGCTGAA CAGTTCTCCA TCGTTGGCAT TGCAAATGTC
GCCGCCGATG CAGGTGTCCA CGGTTGGTTC GTGGGCAACC GCCTGTTGTT GAGTGAGGTG
GGTAGCGCCG ATGTGCGTCT GCTGGGACTG ACTCCCGATA ATCAGTCGGC CTGGTTGTTC
GATCCGGCGG CGGGAGCGGT CTGGCGGCAG GCGTTCGTTG ATCCGCAGCG ACTCGGCCCG
GCATTCGGAA GTGGCTCGCA GTTGCGTCAG GCTGACGCCG TGCCCAAGCC GGAACGGGAA
TGGGAGCGGC AGAGTTTCAC CGATGTCTGG ATTGAGGGCG CCGGTCTCAT GGGAACGACC
CGCGATGGCG TGGTGTTTGA ATTGCATTAT CAGGAACAGC CGATGATTGT CGCGGTGGCG
CCTGACTGGG TGGCGGCGCA GGGCGAGTCC GTGACCGAGA GTCTGCATGC CCTTCTGGCG
ACGGAAGCGC ATCGTCCGTT CATTTCCGTT GCGTCCCGAG ACCCCATCGA GCAGTGGTAC
ATCGTCGACA GCGGGCGATT GGTCCGCGTC GCCGCTGCGG ATTTGCCCAA GGACTTCCAG
TTGCTGGGAA CCCGTCGATA CGCCGACGTC TTGCTGCACG AGCCTGAGGC GCGTTTAGTC
CAGGGCTTCC CGAGCAAGCA TCGGATCGGC CCTCTGGATT ACGTCCGGCG CGTCGGCGAG
GTGCTCGTGA TCCAGGGACG GATGGATGCG AACGACCTCA TGCCGTTGAT CCCCGACGAC
GTGCTCATGT TGGTGGTGCG CATGGGCCGT GGCTCGATGA AATGTCATCT GACGCCGGCG
CTGGCGCGCA AGCTTGATTC TCTGGTGGTC GATTGCCGTT TCCCTTTGGG CGGCACGCCT
TTGGTTCCGG GCCGATTGAT CTGGTCGCCG GATTCGCCAC AGAAGCTTGA GGCAAGTCTG
GTCGGGGATC ATTTGATCGT GGTGGATCCG GACAGCGAGC ACAATCTGAT CTGGCGCAAT
GCGTGTGCGA GTGATACCAG TCTGCGTGGC GATGCGATGC TCGAGGTTCA GGGCTTGCGA
CGTTGCAAGG TATCGTCGCT CGTGCGTTGG TTGATGGAGC GCAGAGGTGG GAGCAATAGT
GTGAAACTTA AAGAACTGTT GGATGAGGCG AAGGGTAAAG TCACTGCCGA CTCTACGCTT
TAA
|
|---|
| Protein sequence | MQGAENSKVE KGFVKFVDLF KLADLERALL PHKGTEQYDA VIRYYFACIG LLDSPRLLQP
LTLFKQALGE LGNHRVRREA ENAPAPSPDS EAALSFAQVS DRVEGFEARL RYGVELMKTP
ATQVPKILHF VWLGGGLGDI QRDYINVWKK VLAGQGYKIN VWYDNDALLA YRTNQLVVEA
AKADAMQHGG VDSATERELG ELYVARVIAL KQQMYQYIND AVAKGESADA ARMQLLVRGY
GQDAQELRRL KTTNRDSIQA LVDGDVQVRD LAGAEKPLQL QALYQREMRL RGNFAAASDV
VRAEVLHLEG GSYTDVDNLP PLLKSVGGVD ISGFSDDARL GLLQLLLNEN PEWMPGRQAL
KSRYVDRTDE IPEAHRQALQ AFAKGKPLLA QVFQPPQDLL VRPYALRAVA VRSTISNGYM
MAHPGSAVLE SVLKRLEFNL GLVDATARLA VQRGVKPEDS EAMQSLALEE LERTYGSIND
LPDMESVFAT YLADAAASYY NDGIRPQSEG TIYLTGPVGI KDGTSDFEKA RLTPRGAQVS
REEMAIEPLL VVNRATEEEL DHSWKDNETD FDKWVESEKQ RWRDGQFKTR YAGNIDELLK
HSTVEFELGW PLIEGRHVIN TELLQRMADH LGEPFTRAMM SGHDGPVTFA DRIPLDFNDR
QLIRNQDTRR RPPASRSHEV TRSLALDEIL TGLGTGAWQL AHLSPLQRLT LGALLGAESL
DEQSFAALGG ALDNLINSLS ERGTSGRYAA IEQHLYQRRP AEFVAGLKSV ADVLPTSSSN
ALSLKKTALS TAVTLHDWGR QVALIQYVAT QEHRQQVQER VEQVLNQFEA GTVKMVPQDL
LLHGAGDTVA GRCFPLVLAM SAALTQGEAA SRRLRERFFL AVLEPDQADS QAFLQAVEEM
HGVKAGDVGT VLGRLDLETV AATLEASVGT RTLMLNSDNH SMLVARTESG TNVTYHFYDP
NFGVFEFDSS VSFKVALGKF FRLGMARHYA AYGEADHPRF DLIDIKGQQV SEQMLSTGVK
VAHLFTEDTL PNVPLRKVRQ RLNSAHGRAL MENPRLGRAL FDADHHWWAE QIASATSRLQ
EGHDSVSPLV PLFSSLEFTH EGPYRLGMLD PNTGELVATV TSIDGRLLRI RNYLSELFST
LGRKPVKAGA TQQATEAAAV HTLNAGFAVQ ALMNALRGRE GDDRTMTTAV RWHAYVNYAQ
LAHGTLFDAA GLIALVKEAL RDEKIIARTS ARVVGEALAP LTGKTIGAVA GHVANEGVGA
VLGLANVGFD IYQLATAQND LETVTYATQL TFDATSLALT GAGMGAGLAG AGTAAAVLGG
AGVIIGGLAV GVTALAQAYA IIAEEAKAVG LFFNELEQAH RGQAYHYKPT QDVWLPRASL
IVTDIDMDTG EVSLESTKLY PLRDHFGVPE FEADYARAIN LSKELGYPDR MRFVPPADQA
IVLPCTPQAC YRYEYQTLPF SSQRHDTGFD IARRLEKRKP DGKWLFLHSF YSFPSHYIVN
RLWPDYRATQ ISVKLDARER KLVVPNIPPA WQDKLSYRLQ GGASLCTLVL SPGANVELVS
AGTQNNRWIL VAPWASESDI QFGKTGAFSV KDCQFKMSGT GPSEVFLVID GGRLLKVEGS
QQRRLVVVQE QAPKGIDGQV LQDHLLALAR DHRLALPYTR INNYPIPFEK AEAPRYTTGW
YDAAEDRVLH IRNDYDLSEE DLMLSAVAGE FAYFHEKDGF DILQVDASTG LLSHRYRLLV
RKQGTGTIRS VEADGHGVLH VVQEYVQPDA TVERFNYLIH DGQMWLSSVN RGLELQFEAL
LDDRHALTDW VPVLGDRFLF PPVLGEREYT TVDWQFAPYV SICWKMDETL RDMAWIRSRD
NLIIRPVPRR HHLRGWRDSV QNLNDLMLLT VAGDNDVFVI YDRLFQKLCR VERTVVQGEN
RWSHRWVQPD RLKEVIAEQN SYLAKTEDGL VFEMGADGNA QFAGVGERWL KGRAQWWLAL
ESLALQHEAE QFSIVGIANV AADAGVHGWF VGNRLLLSEV GSADVRLLGL TPDNQSAWLF
DPAAGAVWRQ AFVDPQRLGP AFGSGSQLRQ ADAVPKPERE WERQSFTDVW IEGAGLMGTT
RDGVVFELHY QEQPMIVAVA PDWVAAQGES VTESLHALLA TEAHRPFISV ASRDPIEQWY
IVDSGRLVRV AAADLPKDFQ LLGTRRYADV LLHEPEARLV QGFPSKHRIG PLDYVRRVGE
VLVIQGRMDA NDLMPLIPDD VLMLVVRMGR GSMKCHLTPA LARKLDSLVV DCRFPLGGTP
LVPGRLIWSP DSPQKLEASL VGDHLIVVDP DSEHNLIWRN ACASDTSLRG DAMLEVQGLR
RCKVSSLVRW LMERRGGSNS VKLKELLDEA KGKVTADSTL
|
|---|
| |