Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0604 |
Symbol | |
ID | 3712114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 696680 |
End bp | 697978 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | nitrite and sulphite reductase 4Fe-4S region |
Protein accession | YP_346337 |
Protein GI | 77456832 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.340906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAACG CCATACGCCC CTCGGCCTGT CCGGGGTTGC TGCGTATCGT CCAGGCGCTG GATGGTGGCA TCTGCCGGAT CAAGCTCGAT GGAGGTTCGA TCACGGCCGA TCAGGCCGAT GCGGTGGCCA ATGCCGCCGA GCGGTTTGCC GGCGGGGCGA TCGAGGCGAC AAACCGGGGC AATCTGCAGA TTCGCGGGAT CGGCGACCAG TCCGCCGCGC TGATCGACAG CCTGCTGGCC GCCGGTCTCG GGCCGCGAAC CGCCGCCGGC GACGACGTGC GCAACCTGAT GCTCAGCCCC GCCGCCGGCA TTGACCGACA GATGCGCTTC GATACCCGTC CATTGGCCGG GCAGATCCTC GAGACCCTGC AAAGCCATCC GCGCTTCCAC GAGCTGAGCG CCAAGTTCGC CGTGCAACTG GATGGCGGTG AAGCGCTGGC GATGCTCAAA CATCCCCATG ATCTGTGGTT GTCGGCATTC GAAAGCGGTG AAAACACGCT GTTGGCGTTT GGCCTGGCGG GTTGCCCGAC GGAGCGACCG TTGGCCGCCG TGGCGCTTGT GGACGGACAT GCGCTGGTGG TCGCGGTGCT GGAGTTGTTC CTTGATCTCG CCCGACCGGA GCAGACGCGG ATGCGCCATC TGCTGGATGA ATGCCCGGCG CCGCTGTTCC TGGAAAAACT CGGTCAGCGG ATCAGCCTGA AAGCCGCTGG TGATTGGCAG CGGGCAGCCG GACCGGAAGG GTTGCACCTC GGCATTCACC CTCAGCCATC GGCCGGTCAG GTCTATGTCG GTGCCGCACC GCCGCTCGGC CGCCTCGGTC CGGACATGCT GCGTGGCGCT GCGCAACTGG CCATAACCTT CGGCGACGGC AGCCTGCGCT TCACCCCTTG GCAGAGTCTG TTGCTGCCCA ATGTGCGGGA AACCGATGCG GTTCAAGTGC TCGACGAATT GGGCAAGCTG AACCTGCTGA CCCATGTCGA AGAGCCTTTA ACGCACCTGA TCGCCTGCAC CGGCGCCAAC GGCTGCGGCA AAGGCCTGGC CGACACCAAA CACGATGCCC GCCTGCTGGC TACGCTGTTG CCACATGCCG TGGATGTGCA CCTGTCCGGC TGCCCGCGTT CCTGCGCCGC CGCACATCGG GCTGCGGTGA CTCTGCTGGC GGTCGGCCCC GGTCACTACG ATCTCTATTT TCGCGATGCA GCGCTGCCGG GTTTCGGCGC GCTGCACGCT CACAACCTTA CTATCGAAGC GGCCGCGACC CTGCTCGCCG CCCGCTCACG GAGCCCCCTT GATGCTTGA
|
Protein sequence | MSNAIRPSAC PGLLRIVQAL DGGICRIKLD GGSITADQAD AVANAAERFA GGAIEATNRG NLQIRGIGDQ SAALIDSLLA AGLGPRTAAG DDVRNLMLSP AAGIDRQMRF DTRPLAGQIL ETLQSHPRFH ELSAKFAVQL DGGEALAMLK HPHDLWLSAF ESGENTLLAF GLAGCPTERP LAAVALVDGH ALVVAVLELF LDLARPEQTR MRHLLDECPA PLFLEKLGQR ISLKAAGDWQ RAAGPEGLHL GIHPQPSAGQ VYVGAAPPLG RLGPDMLRGA AQLAITFGDG SLRFTPWQSL LLPNVRETDA VQVLDELGKL NLLTHVEEPL THLIACTGAN GCGKGLADTK HDARLLATLL PHAVDVHLSG CPRSCAAAHR AAVTLLAVGP GHYDLYFRDA ALPGFGALHA HNLTIEAAAT LLAARSRSPL DA
|
| |